RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ZBTB6Q15916 424 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 CNPY1Q3B7I2 92 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 TMCO4Q5TGY1 634 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 CIR1Q86X95 450 aaPredicted RBP12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 ACTRT2Q8TDY3 377 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 DQX1Q8TE96 717 aaKnown RBP12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 TEKT5Q96M29 485 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 BRD8Q9H0E9 1235 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 SAC3D1A6NKF1 404 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 PTGESO14684 152 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 PAGE1O75459 146 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 SNUPNO95149 360 aaKnown RBP12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 CCR1P32246 355 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 THPOP40225 353 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 CD86P42081 329 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 MAGEA6P43360 314 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 NPY2RP49146 381 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 FUT11Q495W5 492 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 TIGD5Q53EQ6 642 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 STEAP4Q687X5 459 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 ZC3HC1Q86WB0 502 aaKnown RBP12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 C3orf58Q8NDZ4 430 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 MPP4Q96JB8 637 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 SP110Q9HB58 689 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 FBRSL1Q9HCM7 1045 aaKnown RBP12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 OXSMQ9NWU1 459 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 PCDHGB4Q9UN71 923 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 SORCS3Q9UPU3 1222 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 PCDHGB5Q9Y5G0 923 aa12.82□□□□□ -0.36
PPP4R1-202ENST00000400555 SLC1A2P43004 574 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 CD151P48509 253 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 EFEMP1Q12805 493 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 OTUD1Q5VV17 481 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 MAMDC4Q6UXC1 1216 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 SPATA2LQ8IUW3 424 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 SMG8Q8ND04 991 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 BRI3BPQ8WY22 251 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 RHOJQ9H4E5 214 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 NCKIPSDQ9NZQ3 722 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 EGFL7Q9UHF1 273 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 AP4B1Q9Y6B7 739 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 USP3Q9Y6I4 520 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 AHCYL1O43865 530 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 RAB10P61026 200 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 SATB1Q01826 763 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 DPYSQ14117 519 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 DDR2Q16832 855 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 ARMC3Q5W041 872 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 KLC3Q6P597 504 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 NAT14Q8WUY8 206 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 BHMTQ93088 406 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 CYP2S1Q96SQ9 504 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 SLC39A8Q9C0K1 460 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 NACA2Q9H009 215 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 UTP6Q9NYH9 597 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 GMPR2Q9P2T1 348 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 MTF2Q9Y483 593 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 KCTD3Q9Y597 815 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 ERI2A8K979 691 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 CLGNO14967 610 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 SOAT2O75908 522 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 TBX18O95935 607 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 MT-ND1P03886 318 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 GFAPP14136 432 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 PAMP19021 973 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 YWHAQP27348 245 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 PPARGP37231 505 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 HARS2P49590 506 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 STX1BP61266 288 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 CEACAM7Q14002 265 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 FASTKQ14296 549 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 INSCQ1MX18 579 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 PDSS2Q86YH6 399 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 ABTB1Q969K4 478 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 IPO11Q9UI26 975 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-202ENST00000400555 FAM149AA5PLN7 773 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 NR5A2O00482 541 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 UBDO15205 165 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PCSK1P29120 753 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 CHN2P52757 468 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PIM3Q86V86 326 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 MYO1HQ8N1T3 1032 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 ZMIZ2Q8NF64 920 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 JADE3Q92613 823 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 ESAMQ96AP7 390 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 SMARCD1Q96GM5 515 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PKP2Q99959 881 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 RTKNQ9BST9 563 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 WDR6Q9NNW5 1121 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 GNEQ9Y223 722 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 PTGDR2Q9Y5Y4 395 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 COPG1Q9Y678 874 aaKnown RBP12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 ARID2Q68CP9 1835 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 SHROOM3Q8TF72 1996 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
PPP4R1-202ENST00000400555 STRNO43815 780 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms