RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 BORCS6Q96GS4 357 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 LXNQ9BS40 222 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 TAS2R14Q9NYV8 317 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 NXF1Q9UBU9 619 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 C3orf70A6NLC5 250 aaPredicted RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SOBPA7XYQ1 873 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 HAT1O14929 419 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SLC16A4O15374 487 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 EXTL3O43909 919 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZMPSTE24O75844 475 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ALX3O95076 343 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 PTPN7P35236 360 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 SEPHS1P49903 392 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 NIPAL4Q0D2K0 466 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF284Q2VY69 593 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 DCAF12L1Q5VU92 463 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 DUS1LQ6P1R4 473 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF605Q86T29 641 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ADGRF4Q8IZF3 695 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 HEXIM2Q96MH2 286 aaKnown RBP10.08□□□□□ -0.8
PTPRM-203ENST00000400060 CPXM1Q96SM3 734 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 APOL2Q9BQE5 337 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 RUSC1Q9BVN2 902 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 ELOVL6Q9H5J4 265 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 PNPOQ9NVS9 261 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 POLG2Q9UHN1 485 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 KCNH4Q9UQ05 1017 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 GJA3Q9Y6H8 435 aa10.08□□□□□ -0.8
PTPRM-203ENST00000400060 MYH15Q9Y2K3 1946 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 H3BMQ9 156 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 EIF3FO00303 357 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 IFRD1O00458 451 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 NRP2O60462 931 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TFAP2AP05549 437 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 COL6A2P12110 1019 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 ETV3P41162 512 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 ELP6Q0PNE2 266 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 PHF13Q86YI8 300 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 APPL2Q8NEU8 664 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 DCAKDQ8WVC6 231 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 FEM1CQ96JP0 617 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 COG8Q96MW5 612 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 HTATIP2Q9BUP3 242 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TRIM64A6NGJ6 449 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TRIM64BA6NI03 449 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 G3V2T6 193 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 I3L521 148 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 PLD2O14939 933 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TBX1O43435 398 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 IL6P05231 212 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 RPLP0P05388 317 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 HOXB8P17481 243 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 STAT5AP42229 794 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 STAT5BP51692 787 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 SLC12A3P55017 1021 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 CDO1Q16878 200 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 FBXO43Q4G163 708 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 ATP6AP1LQ52LC2 224 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 ADAMTS16Q8TE57 1224 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 SEPHS2Q99611 448 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 RPF2Q9H7B2 306 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 GPN2Q9H9Y4 310 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 EBF1Q9UH73 591 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 EIF3LQ9Y262 564 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 GMPPBQ9Y5P6 360 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 DLG5Q8TDM6 1919 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 E5RI56 91 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 M0QYV0 167 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 HLA-DRAP01903 254 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 NPY2RP49146 381 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 RPS3AP61247 264 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 FOXM1Q08050 763 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 MAD2L1Q13257 205 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 MAB21L1Q13394 359 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 ZNF57Q68EA5 555 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 CGB2Q6NT52 195 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 RHBDF2Q6PJF5 856 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 PID1Q7Z2X4 250 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 CACTIN-AS1Q8N1I8 211 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 SLC4A11Q8NBS3 891 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 FIG4Q92562 907 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 LENG8Q96PV6 779 aaPredicted RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 EBNA1BP2Q99848 306 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TRMOQ9BU70 441 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 STAP1Q9ULZ2 295 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TBC1D30Q9Y2I9 924 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 N6AMT1Q9Y5N5 214 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 MRPS14O60783 128 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 VARSP26640 1264 aaKnown RBP10.07□□□□□ -0.8
PTPRM-203ENST00000400060 NFE2L1Q14494 772 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 SLX4IPQ5VYV7 408 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 IGFN1Q86VF2 1251 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 TICAM1Q8IUC6 712 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 C10orf107Q8IVU9 208 aa10.07□□□□□ -0.8
PTPRM-203ENST00000400060 SLC44A5Q8NCS7 719 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms