RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 KHDRBS3O75525 346 aaKnown RBP13.9□□□□□ -0.19
VAPA-202ENST00000400000 ATP6AP2O75787 350 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 NR2F1P10589 423 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 GP5P40197 560 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 HSPA13P48723 471 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.19
VAPA-202ENST00000400000 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 LRRC73Q5JTD7 316 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 OXNAD1Q96HP4 312 aaPredicted RBP13.9□□□□□ -0.19
VAPA-202ENST00000400000 CXorf56Q9H5V9 222 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 MARCH7Q9H992 704 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.9□□□□□ -0.192e-8■■■■■ 26.8
VAPA-202ENST00000400000 ST3GAL5Q9UNP4 418 aa13.9□□□□□ -0.19
VAPA-202ENST00000400000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.19
VAPA-202ENST00000400000 A0A1W2PQ67 120 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 FCHO1O14526 889 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 RASGRP1O95267 797 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 IL6P05231 212 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 GOT1P17174 413 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 SYN1P17600 705 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 CRABP2P29373 138 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 PPIL2Q13356 520 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 DPYSL3Q14195 570 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 USP50Q70EL3 339 aaPredicted RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 STK39Q9UEW8 545 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 NCOA3Q9Y6Q9 1424 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 PAPSS1O43252 624 aaPredicted RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 RBMXL2O75526 392 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 NELFEP18615 380 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 MSX2P35548 267 aaPredicted RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 SNRPD1P62314 119 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 SEMG2Q02383 582 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 UBAP2LQ14157 1087 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 TNS4Q8IZW8 715 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 CLOCKO15516 846 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 TRIM3O75382 744 aaPredicted RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 ACRP10323 421 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 TFPIP10646 304 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 ZNHIT3Q15649 155 aaPredicted RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 REPS1Q96D71 796 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 RNF31Q96EP0 1072 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 PANX3Q96QZ0 392 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 WRAP53Q9BUR4 548 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 SH3GLB1Q9Y371 365 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 MCIDASD6RGH6 385 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 PSIP1O75475 530 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
VAPA-202ENST00000400000 CCNJLQ8IV13 435 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 CDYL2Q8N8U2 506 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 KIAA1683Q9H0B3 1180 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 DUSP4Q13115 394 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 NDUFAF6Q330K2 333 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 CCDC153Q494R4 210 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 ENKURQ8TC29 256 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 PCDH9Q9HC56 1237 aa13.89□□□□□ -0.19
VAPA-202ENST00000400000 KANSL1LA0AUZ9 987 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 MAT2AP31153 395 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 SLC26A2P50443 739 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 GNA13Q14344 377 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 CPSF6Q16630 551 aaKnown RBP eCLIP13.88□□□□□ -0.192e-7■■■■■ 40.8
VAPA-202ENST00000400000 OMA1Q96E52 524 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 TRNT1Q96Q11 434 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 SLC25A14O95258 325 aaPredicted RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 BCL10O95999 233 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 UNC5AQ6ZN44 842 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 PTGR2Q8N8N7 351 aaPredicted RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 SLC28A3Q9HAS3 691 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 PCDHGA3Q9Y5H0 932 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 ERN1O75460 977 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 SHBGP04278 402 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 AQP1P29972 269 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 LINGO4Q6UY18 593 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 ZNF563Q8TA94 476 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 FRMD8P1Q9BZ68 369 aaPredicted RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 HIPK3Q9H422 1215 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 ASF1AQ9Y294 204 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 CXCL11O14625 94 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 CD3EAPO15446 510 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 LDLRP01130 860 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 CCNB1P14635 433 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 ITPKAP23677 461 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 DGKAP23743 735 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 EIF2B2P49770 351 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 RAD23AP54725 363 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 NUP107P57740 925 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 EVX2Q03828 476 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 ENGASEQ8NFI3 743 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 OR4A15Q8NGL6 344 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 KCTD4Q8WVF5 259 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 LGMNQ99538 433 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 BHLHE41Q9C0J9 482 aaPredicted RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 TMEM138Q9NPI0 162 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 KBTBD4Q9NVX7 518 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms