RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 DUSP12Q9UNI6 340 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 SNX24Q9Y343 169 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 ARIH1Q9Y4X5 557 aaPredicted RBP6.95□□□□□ -1.3
USP16-203ENST00000399975 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.95□□□□□ -1.3
USP16-203ENST00000399975 CBX4O00257 560 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 ALOX15BO15296 676 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 IFNB1P01574 187 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 APODP05090 189 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 DLDP09622 509 aaKnown RBP6.95□□□□□ -1.3
USP16-203ENST00000399975 TSHRP16473 764 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 NFKB1P19838 968 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 PSMB4P28070 264 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 ITGA8P53708 1063 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 NIPAL4Q0D2K0 466 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 CALCOCO2Q13137 446 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 ZNF235Q14590 738 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
USP16-203ENST00000399975 TMEM196Q5HYL7 178 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 LRRC8BQ6P9F7 803 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 B4GALNT4Q76KP1 1039 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 LINC00523Q86TU6 105 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 PRPF39Q86UA1 669 aaKnown RBP6.95□□□□□ -1.3
USP16-203ENST00000399975 CCDC33Q8N5R6 958 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 AENQ8WTP8 325 aaKnown RBP6.95□□□□□ -1.3
USP16-203ENST00000399975 VOPP1Q96AW1 172 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 C19orf43Q9BQ61 176 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 CASS4Q9NQ75 786 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 RAB6BQ9NRW1 208 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 SEPT10Q9P0V9 454 aa6.95□□□□□ -1.3
USP16-203ENST00000399975 THAP10Q9P2Z0 257 aaPredicted RBP6.95□□□□□ -1.3
USP16-203ENST00000399975 ANKRD36A6QL64 1941 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 LOC285095A0A1B0GVY8 99 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 A0A1W2PQ67 120 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 TSPAN11A1L157 253 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 SPECC1L-ADORA2AF8WAN1 911 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 MUSKO15146 869 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 IL9P15248 144 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 DRD1P21728 446 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 CARSP49589 748 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 RPL26P61254 145 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 VSNL1P62760 191 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 C22orf39Q6P5X5 142 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 EMBQ6PCB8 327 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 SRLQ86TD4 932 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 PRUNE1Q86TP1 453 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 MREGQ8N565 214 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 LRRN4Q8WUT4 740 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 UCMAQ8WVF2 138 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 LRRC39Q96DD0 335 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 LRIG1Q96JA1 1093 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 FEM1CQ96JP0 617 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 P2RY13Q9BPV8 354 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 RASSF4Q9H2L5 321 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 TMEM245Q9H330 911 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 XAB2Q9HCS7 855 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 NT5MQ9NPB1 228 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 GTSE1Q9NYZ3 720 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 FAM153AQ9UHL3 310 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 RPL26L1Q9UNX3 145 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 TCF20Q9UGU0 1960 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 SHISA7A6NL88 538 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 MAN2B1O00754 1011 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 INSIG1O15503 277 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 SOCS5O75159 536 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 KAT7O95251 611 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 PSMA3P25788 255 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 CTHP32929 405 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 GALK1P51570 392 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 SARNPP82979 210 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 PRKCQQ04759 706 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 FRG1Q14331 258 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 TRIP13Q15645 432 aaPredicted RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 MAP9Q49MG5 647 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 ZNF534Q76KX8 674 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 ZNF687Q8N1G0 1237 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 NAT16Q8N8M0 369 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 OXNAD1Q96HP4 312 aaPredicted RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 GDAP1L1Q96MZ0 367 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 AGAP3Q96P47 875 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 TRIB3Q96RU7 358 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 DPH5Q9H2P9 285 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 MTRF1LQ9UGC7 380 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 CKAP5Q14008 2032 aa6.94□□□□□ -1.3
USP16-203ENST00000399975 ATXN2Q99700 1313 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 ZNF106Q9H2Y7 1883 aaKnown RBP6.94□□□□□ -1.3
USP16-203ENST00000399975 PRRT4C9JH25 899 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 HTRA2O43464 458 aaPredicted RBP6.93□□□□□ -1.3
USP16-203ENST00000399975 FZD6O60353 706 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 IGSF6O95976 241 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
USP16-203ENST00000399975 NPY2RP49146 381 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 NRLP54845 237 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 SNRPD1P62314 119 aaKnown RBP6.93□□□□□ -1.3
USP16-203ENST00000399975 TRADDQ15628 312 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 CARD16Q5EG05 197 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 DGKKQ5KSL6 1271 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 ANKRD22Q5VYY1 191 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 NAPEPLDQ6IQ20 393 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 RANBP10Q6VN20 620 aa6.93□□□□□ -1.3
USP16-203ENST00000399975 ZNF354CQ86Y25 554 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms