RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LIMD1Q9UGP4 676 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 MEN1O00255 615 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 GHDCQ8N2G8 530 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PTPN4P29074 926 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TMPRSS6Q8IU80 811 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ANKMY2Q8IV38 441 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 C22orf15Q8WYQ4 148 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 BTBD2Q9BX70 525 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 CPVLQ9H3G5 476 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM260Q9NX78 707 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 GNG8Q9UK08 70 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 NCOA1Q15788 1441 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 GSTT2P0CG29 244 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 RPL7P18124 248 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 RIDAP52758 137 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TTI2Q6NXR4 508 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 RAB6BQ9NRW1 208 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TNFSF13BQ9Y275 285 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 A8MXE2 369 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 KLRF2D3W0D1 207 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 CIDEAO60543 219 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PGLSO95336 258 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 GRIA1P42261 906 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 CACNB2Q08289 660 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 GRK1Q15835 563 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 PCDHB16Q9NRJ7 776 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 FARSBQ9NSD9 589 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 STAU1O95793 577 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 ADGRG2Q8IZP9 1017 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 OFCC1Q8IZS5 231 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 FCGR1BQ92637 280 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM100Q9NV29 134 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 EHBP1L1Q8N3D4 1523 aa8.67□□□□□ -1.02
CACNA1C-220ENST00000399655 APLP1P51693 650 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CERCAMQ5T4B2 595 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CREB3L2Q70SY1 520 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF540Q8NDQ6 660 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PCDH12Q9NPG4 1184 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 MAN2B2Q9Y2E5 1009 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PCDHGA1Q9Y5H4 931 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 IDH2P48735 452 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM31Q5JXX7 168 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 RTL4Q6ZR62 310 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ZC3H7AQ8IWR0 971 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PHC2Q8IXK0 858 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 GOLM1Q8NBJ4 401 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 GRIP2Q9C0E4 1043 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TCF7L2Q9NQB0 619 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 EMILIN3Q9NT22 766 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 GMPPBQ9Y5P6 360 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 URADA6NGE7 173 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC16A3O15427 465 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TTLL1O95922 423 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF37AP17032 561 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CTNNB1P35222 781 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 VLDLRP98155 873 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 MED22Q15528 200 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 DCDC5Q6ZRR9 648 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 REEP2Q9BRK0 252 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 FAIM2Q9BWQ8 316 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ORC1Q13415 861 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TBC1D10AQ9BXI6 508 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM120AQ9BXJ8 343 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TVP23AA6NH52 213 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ZSCAN5BA6NJL1 495 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC30A4O14863 429 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC19A2O60779 497 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 UGT2B10P36537 528 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PTGER2P43116 358 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CHRNDQ07001 517 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 MCEMP1Q8IX19 187 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TMED9Q9BVK6 235 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ABHD10Q9NUJ1 306 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 NDUFAF1Q9Y375 327 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ATG12O94817 140 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 RARBP10826 455 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 NR1I3Q14994 352 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 IL31Q6EBC2 164 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TTLL2Q9BWV7 592 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 RPS9P46781 194 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TAS2R39P59534 338 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CDK3Q00526 305 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 KIF2BQ8N4N8 673 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC44A1Q8WWI5 657 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF419Q96HQ0 510 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CCDC17Q96LX7 622 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ANKEF1Q9NU02 776 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM86C1Q9NVL1 165 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 GTF3C4Q9UKN8 822 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PCDHA4Q9UN74 947 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 POLR3AO14802 1390 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ACEP12821 1306 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ANXA2P2A6NMY6 339 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 UBDO15205 165 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ANXA2P07355 339 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 NEK3P51956 506 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 EFNA5P52803 228 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TNK2Q07912 1038 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms