RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 C11orf74Q86VG3 221 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 SUMF1Q8NBK3 374 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 CCNYQ8ND76 341 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 NSMCE1Q8WV22 266 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 ARRDC3Q96B67 414 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 HDAC11Q96DB2 347 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 LGMNQ99538 433 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 OMDQ99983 421 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 TRMT1Q9NXH9 659 aaKnown RBP18.43■□□□□ 0.54
SBF1-203ENST00000399627 WSB2Q9NYS7 404 aaPredicted RBP18.43■□□□□ 0.54
SBF1-203ENST00000399627 SAE1Q9UBE0 346 aaPredicted RBP18.43■□□□□ 0.54
SBF1-203ENST00000399627 RAB23Q9ULC3 237 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 PYCARDQ9ULZ3 195 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 NCKAP1Q9Y2A7 1128 aa18.43■□□□□ 0.54
SBF1-203ENST00000399627 RIF1Q5UIP0 2472 aaKnown RBP18.43■□□□□ 0.54
SBF1-203ENST00000399627 DOCK9Q9BZ29 2069 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 MUSKO15146 869 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 INSIG1O15503 277 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 NDUFS2O75306 463 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 RNASEH2AO75792 299 aaKnown RBP18.42■□□□□ 0.54
SBF1-203ENST00000399627 DRD3P35462 400 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 PI4KAP42356 2102 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 RPL6Q02878 288 aaKnown RBP18.42■□□□□ 0.54
SBF1-203ENST00000399627 RAD51Q06609 339 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 ZNF235Q14590 738 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 PDK1Q15118 436 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 MEI1Q5TIA1 1274 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 DCAF12L1Q5VU92 463 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 PMS2CLQ68D20 193 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 TIGD7Q6NT04 549 aaPredicted RBP18.42■□□□□ 0.54
SBF1-203ENST00000399627 CCDC13Q8IYE1 715 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 DEFB119Q8N690 84 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 TRIM58Q8NG06 486 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 UBE2Q2Q8WVN8 375 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 MAML1Q92585 1016 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 NKD2Q969F2 451 aaPredicted RBP18.42■□□□□ 0.54
SBF1-203ENST00000399627 VOPP1Q96AW1 172 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 HAUS1Q96CS2 278 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 ZC3H10Q96K80 434 aaKnown RBP18.42■□□□□ 0.54
SBF1-203ENST00000399627 OLFM3Q96PB7 478 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 PSKH2Q96QS6 385 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 NEUROG2Q9H2A3 272 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 EFR3BQ9Y2G0 817 aa18.42■□□□□ 0.54
SBF1-203ENST00000399627 TNRC6BQ9UPQ9 1833 aaKnown RBP18.42■□□□□ 0.54
SBF1-203ENST00000399627 EP300Q09472 2414 aaPredicted RBP18.41■□□□□ 0.54
SBF1-203ENST00000399627 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 MATN3O15232 486 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 LMNAP02545 664 aaKnown RBP18.41■□□□□ 0.54
SBF1-203ENST00000399627 ACSL1P33121 698 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 MMP13P45452 471 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 NR2C2P49116 596 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 RENBPP51606 427 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 PPIDQ08752 370 aaKnown RBP18.41■□□□□ 0.54
SBF1-203ENST00000399627 CNTN1Q12860 1018 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 RPS6KA1Q15418 735 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 ELF2Q15723 593 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 MARC1Q5VT66 337 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.41■□□□□ 0.54
SBF1-203ENST00000399627 B4GALNT4Q76KP1 1039 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 SRLQ86TD4 932 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 TMEFF1Q8IYR6 380 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 BBS5Q8N3I7 341 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 PGBD5Q8N414 524 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 FATE1Q969F0 183 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 GPR174Q9BXC1 333 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 BTBD1Q9H0C5 482 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 NT5MQ9NPB1 228 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 FZD4Q9ULV1 537 aa18.41■□□□□ 0.54
SBF1-203ENST00000399627 FAM186AA6NE01 2351 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 PPP1R12AO14974 1030 aaPredicted RBP18.4■□□□□ 0.54
SBF1-203ENST00000399627 GJB3O75712 270 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 RHOBTB1O94844 696 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 UGT2B4P06133 528 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 HSPA9P38646 679 aaKnown RBP18.4■□□□□ 0.54
SBF1-203ENST00000399627 CSNK1DP48730 415 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 NSUN2Q08J23 767 aaKnown RBP eCLIP18.4■□□□□ 0.54
SBF1-203ENST00000399627 AP1B1Q10567 949 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 HNRNPDQ14103 355 aaKnown RBP18.4■□□□□ 0.54
SBF1-203ENST00000399627 CCDC181Q5TID7 509 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 BZW1Q7L1Q6 419 aaKnown RBP18.4■□□□□ 0.54
SBF1-203ENST00000399627 LPCAT2Q7L5N7 544 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 TEX26Q8N6G2 289 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 P3H4Q92791 437 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 ZNF419Q96HQ0 510 aaPredicted RBP18.4■□□□□ 0.54
SBF1-203ENST00000399627 LRIG1Q96JA1 1093 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 CPEB1Q9BZB8 566 aaKnown RBP18.4■□□□□ 0.54
SBF1-203ENST00000399627 SGK2Q9HBY8 427 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 DYRK4Q9NR20 520 aa18.4■□□□□ 0.54
SBF1-203ENST00000399627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
SBF1-203ENST00000399627 ZFHX2Q9C0A1 2572 aaPredicted RBP18.4■□□□□ 0.54
SBF1-203ENST00000399627 TRPM6Q9BX84 2022 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 TTC24A2A3L6 582 aaPredicted RBP18.39■□□□□ 0.53
SBF1-203ENST00000399627 USP27XA6NNY8 438 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 APOC4-APOC2K7ER74 178 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 PIGNO95427 931 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 SEMA4FO95754 770 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 APOC2P02655 101 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 CCNB1P14635 433 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 ITGB7P26010 798 aa18.39■□□□□ 0.53
SBF1-203ENST00000399627 DHPSP49366 369 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms