RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SCAMP3O14828 347 aaKnown RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 TEX28O15482 410 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 KLHL41O60662 606 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 SEC22BO75396 215 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 MAPKAPK2P49137 400 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PLOD1Q02809 727 aaPredicted RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 NTRK3Q16288 839 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 UGCGQ16739 394 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 ZNF776Q68DI1 518 aaPredicted RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 TTI2Q6NXR4 508 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PRSS55Q6UWB4 352 aaPredicted RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 DPP10Q8N608 796 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 POF1BQ8WVV4 589 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 FUBP3Q96I24 572 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP47-203ENST00000399455 C9orf72Q96LT7 481 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 TMEM121Q9BTD3 319 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 IMPAD1Q9NX62 359 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 DNAJC16Q9Y2G8 782 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PNMA6AP0CW24 399 aaPredicted RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 ALAS2P22557 587 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 LAPTM5Q13571 262 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PRMT9Q6P2P2 845 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 RAB11FIP5Q9BXF6 653 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 MORF4L1Q9UBU8 362 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 MAFFQ9ULX9 164 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 A0A1B0GVM2 712 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 TCAF2A6NFQ2 919 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CLDN4O14493 209 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 MGAT1P26572 445 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 CYP4F8P98187 520 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 PURAQ00577 322 aaKnown RBP8.03□□□□□ -1.12
USP47-203ENST00000399455 SEL1L3Q68CR1 1132 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 GAS2L3Q86XJ1 694 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 SYT12Q8IV01 421 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 IL1RL2Q9HB29 575 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 NPHS2Q9NP85 383 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 ARHGAP28Q9P2N2 729 aa8.03□□□□□ -1.12
USP47-203ENST00000399455 A0A0B4J269 797 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ESYT3A0FGR9 886 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 PSMA4P25789 261 aaKnown RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 IRGCQ6NXR0 463 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ARL14EPQ8N8R7 260 aaPredicted RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 S100A13Q99584 98 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 CYP4F12Q9HCS2 524 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ZFP37Q9Y6Q3 630 aaPredicted RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 C10orf71Q711Q0 1435 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ATRNL1Q5VV63 1379 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 VSTM5A8MXK1 200 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 NRP1O14786 923 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SERPINI2O75830 405 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ITGAVP06756 1048 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 HNRNPA1P09651 372 aaKnown RBP eCLIP8.02□□□□□ -1.13
USP47-203ENST00000399455 CSTF2P33240 577 aaKnown RBP eCLIP8.02□□□□□ -1.13
USP47-203ENST00000399455 GGCXP38435 758 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 MASP1P48740 699 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 VSNL1P62760 191 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SLC25A52Q3SY17 297 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 C2CD6Q53TS8 623 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 MFSD7Q6UXD7 560 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 CHSY3Q70JA7 882 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 TMEM192Q8IY95 271 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 MOSPD2Q8NHP6 518 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SEMA3CQ99985 751 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ZNF670Q9BS34 389 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ADNPQ9H2P0 1102 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SKAP2O75563 359 aaPredicted RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 TPH1P17752 444 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 CTPS1P17812 591 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ARL2P36404 184 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 MRPS22P82650 360 aaKnown RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 ABRQ12979 859 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 CCINQ13939 588 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 NFYCQ13952 458 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SF1Q15637 639 aaKnown RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 FUT11Q495W5 492 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 CERCAMQ5T4B2 595 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 R3HCC1LQ7Z5L2 792 aaKnown RBP8.02□□□□□ -1.13
USP47-203ENST00000399455 PARGQ86W56 976 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 HID1Q8IV36 788 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 AIF1LQ9BQI0 150 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 PCBD2Q9H0N5 130 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 CD207Q9UJ71 328 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ANAPC2Q9UJX6 822 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 PLIN4Q96Q06 1357 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SPAM1P38567 509 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 HSPA14Q0VDF9 509 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 LRRC14Q15048 493 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 LDLRAP1Q5SW96 308 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 BROXQ5VW32 411 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 CNSTQ6PJW8 725 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 LRRC69Q6ZNQ3 347 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SLC26A11Q86WA9 606 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 ADGRG2Q8IZP9 1017 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 C4orf33Q8N1A6 199 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 BPIFB1Q8TDL5 484 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 HGH1Q9BTY7 390 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 SIRPGQ9P1W8 387 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
USP47-203ENST00000399455 PCDHB3Q9Y5E6 796 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms