RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CHRAC1Q9NRG0 131 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 BARX2Q9UMQ3 279 aaPredicted RBP10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 COQ6Q9Y2Z9 468 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 VWA5AO00534 786 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 WDR46O15213 610 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 MFSD11O43934 449 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 ENDOD1O94919 500 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 KCNH1O95259 989 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 PGAM1P18669 254 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 UGT1A1P22309 533 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 UGT1A4P22310 534 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 UGT1A3P35503 534 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 UGT1A5P35504 534 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 HSPA13P48723 471 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CLCN3P51790 818 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 NUP107P57740 925 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 LAMTOR4Q0VGL1 99 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 PPP1R3AQ16821 1122 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 ANO4Q32M45 955 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 ZBTB8OSQ8IWT0 167 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 TTC16Q8NEE8 873 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CANT1Q8WVQ1 401 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 ABHD8Q96I13 439 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CSPG4P5Q96PW8 444 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 PIF1Q9H611 641 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 ZFAND3Q9H8U3 227 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CXorf21Q9HAI6 301 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CLK4Q9HAZ1 481 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 PLK2Q9NYY3 685 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 KLK14Q9P0G3 267 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CPSF3Q9UKF6 684 aaKnown RBP10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 BTBD19C9JJ37 291 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 K7EPI3 171 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 GRID2O43424 1007 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 HTRA2O43464 458 aaPredicted RBP10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 GCATO75600 419 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 ZNF182P17025 639 aaPredicted RBP10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 MAGEA3P43357 314 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 STAT5BP51692 787 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CCDC153Q494R4 210 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 DDHD1Q8NEL9 900 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 FBXL20Q96IG2 436 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 CPB2Q96IY4 423 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC45A3Q96JT2 553 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 RMI1Q9H9A7 625 aa10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.01□□□□□ -0.81
PTCHD4-202ENST00000398738 A0A0A0MRY4 1105 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 RBM47A0AV96 593 aaKnown RBP10□□□□□ -0.81
PTCHD4-202ENST00000398738 PRORSD1PA6NEY8 169 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TCAF2A6NFQ2 919 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 ACOT8O14734 319 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 CILPO75339 1184 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 ARL4AP40617 200 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 EIF2B2P49770 351 aaKnown RBP10□□□□□ -0.81
PTCHD4-202ENST00000398738 RELAQ04206 551 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 GRM3Q14832 879 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 CHSY3Q70JA7 882 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 RDM1Q8NG50 284 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 MAML3Q96JK9 1138 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 CNDP1Q96KN2 507 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 SPATA13Q96N96 652 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 MRIQ9BWK5 157 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 PRDM12Q9H4Q4 367 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 PNPLA3Q9NST1 481 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TUBGCP4Q9UGJ1 667 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 RAP2CQ9Y3L5 183 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 ANKRD12Q6UB98 2062 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TRIM38O00635 465 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 FBP2O00757 339 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TPSB2P20231 275 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TMED10P49755 219 aaKnown RBP10□□□□□ -0.81
PTCHD4-202ENST00000398738 AP3M2P53677 418 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 HMGCS2P54868 508 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 MCCD1P59942 119 aaPredicted RBP10□□□□□ -0.81
PTCHD4-202ENST00000398738 PHEXP78562 749 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 FOXC1Q12948 553 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 SEMA5AQ13591 1074 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TRIM25Q14258 630 aaKnown RBP10□□□□□ -0.81
PTCHD4-202ENST00000398738 TGFBIQ15582 683 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TPSAB1Q15661 275 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 KIZQ2M2Z5 673 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 SETD3Q86TU7 594 aaPredicted RBP10□□□□□ -0.81
PTCHD4-202ENST00000398738 SNX29P2Q8IUI4 249 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC41A1Q8IVJ1 513 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 USP33Q8TEY7 942 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 VPS39Q96JC1 886 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 OSBPL11Q9BXB4 747 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 MINDY3Q9H8M7 445 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 PTPRHQ9HD43 1115 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 ZNF277Q9NRM2 450 aaPredicted RBP10□□□□□ -0.81
PTCHD4-202ENST00000398738 NRBP2Q9NSY0 501 aa10□□□□□ -0.81
PTCHD4-202ENST00000398738 TNFRSF10AO00220 468 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 B4GAT1O43505 415 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 RECKO95980 971 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 CCDC130P13994 396 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 BAG6P46379 1132 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 SLC7A2P52569 658 aa9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 RPL26P61254 145 aaKnown RBP9.99□□□□□ -0.81
PTCHD4-202ENST00000398738 PITX1P78337 314 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms