RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 CATSPERBQ9H7T0 1116 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 DKK4Q9UBT3 224 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 FZD10Q9ULW2 581 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 BTBD3Q9Y2F9 522 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 ACTL7AQ9Y615 435 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 WASF2Q9Y6W5 498 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 TENM4Q6N022 2769 aa13.66□□□□□ -0.22
VCX3A-202ENST00000398729 A0A1W2PQU0 124 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 TRABD2BA6NFA1 517 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 ZSCAN5CA6NGD5 496 aaPredicted RBP13.65□□□□□ -0.22
VCX3A-202ENST00000398729 CD160O95971 181 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 GZMAP12544 262 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 PSMA2P25787 234 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 ITGB7P26010 798 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 PRKCIP41743 596 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 ARRB1P49407 418 aaPredicted RBP13.65□□□□□ -0.22
VCX3A-202ENST00000398729 NEK3P51956 506 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 NXPH1P58417 271 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 CYP4F3Q08477 520 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 KLHL30Q0D2K2 578 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 NR1I3Q14994 352 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 PRAMEF14Q5SWL7 426 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 PLEKHA7Q6IQ23 1121 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 IQCHQ86VS3 1027 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 HORMAD1Q86X24 394 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 ZNF354CQ86Y25 554 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 RYBPQ8N488 228 aaPredicted RBP13.65□□□□□ -0.22
VCX3A-202ENST00000398729 OXR1Q8N573 874 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 ZDHHC6Q9H6R6 413 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 ERVMER34-1Q9H9K5 563 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 MGAQ8IWI9 3026 aa13.65□□□□□ -0.22
VCX3A-202ENST00000398729 RNF103O00237 685 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 SLC31A1O15431 190 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 FGF10O15520 208 aaPredicted RBP13.64□□□□□ -0.23
VCX3A-202ENST00000398729 TNFSF14O43557 240 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 KDELR3O43731 214 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 PCDH8O95206 1070 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 FTLP02792 175 aaPredicted RBP13.64□□□□□ -0.23
VCX3A-202ENST00000398729 ITGAVP06756 1048 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 ADRB3P13945 408 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 HTR7P34969 479 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 YBEYP58557 167 aaPredicted RBP13.64□□□□□ -0.23
VCX3A-202ENST00000398729 SNRPD1P62314 119 aaKnown RBP13.64□□□□□ -0.23
VCX3A-202ENST00000398729 OGDHQ02218 1023 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 FIGNQ5HY92 759 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 FBXL19Q6PCT2 694 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 ZNF571Q7Z3V5 609 aaPredicted RBP13.64□□□□□ -0.23
VCX3A-202ENST00000398729 LUZP1Q86V48 1076 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 GATAD2AQ86YP4 633 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 TTYH3Q9C0H2 523 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 CBX8Q9HC52 389 aa13.64□□□□□ -0.23
VCX3A-202ENST00000398729 DOCK9Q9BZ29 2069 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 PTPRQQ9UMZ3 2332 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 WASH4PA8MWX3 477 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 GOLGA6L19H0YKK7 550 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 DDX3XO00571 662 aaKnown RBP eCLIP13.63□□□□□ -0.23
VCX3A-202ENST00000398729 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
VCX3A-202ENST00000398729 BUB1O43683 1085 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 RNF8O76064 485 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 POP4O95707 220 aaKnown RBP13.63□□□□□ -0.23
VCX3A-202ENST00000398729 GSRP00390 522 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 PRLRP16471 622 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 PTMSP20962 102 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 HNRNPA2B1P22626 353 aaKnown RBP13.63□□□□□ -0.23
VCX3A-202ENST00000398729 AKT2P31751 481 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 RXRGP48443 463 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 TPI1P60174 286 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 FANCCQ00597 558 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 SHBQ15464 509 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 ZNF284Q2VY69 593 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 PARP15Q460N3 678 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 E4F1Q66K89 784 aaPredicted RBP13.63□□□□□ -0.23
VCX3A-202ENST00000398729 LEKR1Q6ZMV7 388 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 TMEM145Q8NBT3 493 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 OR2AP1Q8NGE2 309 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 OR6K2Q8NGY2 324 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 SAP25Q8TEE9 199 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 FNIP1Q8TF40 1166 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 CASKIN2Q8WXE0 1202 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 KLK6Q92876 244 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 TRIM11Q96F44 468 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 KLHDC7BQ96G42 594 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 MYOCQ99972 504 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 OSBPL1AQ9BXW6 950 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
VCX3A-202ENST00000398729 FTSJ1Q9UET6 329 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 CNOT8Q9UFF9 292 aaKnown RBP13.63□□□□□ -0.23
VCX3A-202ENST00000398729 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
VCX3A-202ENST00000398729 SHROOM3Q8TF72 1996 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 A0A087WV48 116 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 FAM149AA5PLN7 773 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 TMEM191CA6NGB0 347 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
VCX3A-202ENST00000398729 EIF3CLB5ME19 914 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms