RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 EFCAB3Q8N7B9 438 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 MAGEC3Q8TD91 643 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 CPNE1Q99829 537 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 SEMA4BQ9NPR2 832 aaPredicted RBP14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 LIMD1Q9UGP4 676 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 DNPEPQ9ULA0 475 aa14.4□□□□□ -0.1
PCDHA11-201ENST00000398640 TM9SF1O15321 606 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 CTPS1P17812 591 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 CALB2P22676 271 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 EEF1DP3Q658K8 133 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 SPPL2BQ8TCT7 592 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 RERGQ96A58 199 aaPredicted RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 HDHD2Q9H0R4 259 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 AVENQ9NQS1 362 aaPredicted RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 CATSPERZQ9NTU4 200 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 NFKB1P19838 968 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 PSMB9P28065 219 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 NPY2RP49146 381 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 ZNF544Q6NX49 715 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 CASP12Q6UXS9 341 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 EXOC2Q96KP1 924 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 NDUFAF1Q9Y375 327 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 RBL1P28749 1068 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 CRABP2P29373 138 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 GCNT1Q02742 428 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 ITIH4Q14624 930 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 ZNF792Q3KQV3 632 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 SYT12Q8IV01 421 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 RNFT2Q96EX2 444 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 KANSL1LA0AUZ9 987 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 ISM1B1AKI9 464 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 OR10H2O60403 315 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 PABPC1P11940 636 aaKnown RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 GP5P40197 560 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 C1QTNF8P60827 252 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 CRADDP78560 199 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 MAD2L1Q13257 205 aaPredicted RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM98BQ52LJ0 330 aaKnown RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 TCP10LQ8TDR4 215 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 MARK4Q96L34 752 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 TMEM79Q9BSE2 394 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 TRIT1Q9H3H1 467 aaKnown RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 ASB8Q9H765 288 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 RPRD1BQ9NQG5 326 aaKnown RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 TRHDEQ9UKU6 1024 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 NR2C2P49116 596 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 SMAD3P84022 425 aaKnown RBP14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 AAK1Q2M2I8 961 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 CCDC153Q494R4 210 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 NEK10Q6ZWH5 1172 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 GPSM1Q86YR5 675 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 SLC24A2Q9UI40 661 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 SIK3Q9Y2K2 1263 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 PCDHA3Q9Y5H8 950 aa14.39□□□□□ -0.11
PCDHA11-201ENST00000398640 A0A0B4J269 797 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 PIPSLA2A3N6 862 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 VAV1P15498 845 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 NUP62P37198 522 aaPredicted RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 RPL21P46778 160 aaKnown RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 C1DQ13901 141 aaKnown RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 CRTC3Q6UUV7 619 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 HEATR4Q86WZ0 1026 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 PXYLP1Q8TE99 480 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 TMPRSS4Q9NRS4 437 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 CCDC167Q9P0B6 97 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 PHGDHO43175 533 aaKnown RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 RIPK2O43353 540 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 TSPAN1O60635 241 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 PTPN2P17706 415 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 DUSP4Q13115 394 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 TRIM16LQ309B1 348 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 SCARA3Q6AZY7 606 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 SCAIQ8N9R8 606 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 ARHGEF3Q9NR81 526 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 OPTCQ9UBM4 332 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 OR12D3Q9UGF7 316 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 VAV3Q9UKW4 847 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 HNRNPH1P31943 449 aaKnown RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 SCTRP47872 440 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 ZCWPW2Q504Y3 356 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 WDR93Q6P2C0 686 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 AGMOQ6ZNB7 445 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 NRSN1Q8IZ57 195 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 LRRC52Q8N7C0 313 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 OR6K2Q8NGY2 324 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 MYCBPAPQ8TBZ2 947 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 TMEM237Q96Q45 408 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 MLPHQ9BV36 600 aaPredicted RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 KLHL4Q9C0H6 718 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM153BP0C7A2 387 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 PECAM1P16284 738 aaPredicted RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM153CQ494X1 144 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 CYP2R1Q6VVX0 501 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 LZTR1Q8N653 840 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 ZSCAN18Q8TBC5 510 aaPredicted RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 SH3GL3Q99963 347 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 RIBC2Q9H4K1 309 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms