RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ACPPP15309 386 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 VPS41P49754 854 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 RAP1GDS1P52306 607 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 SLC12A2P55011 1212 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PREPLQ4J6C6 727 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 IL23RQ5VWK5 629 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PLPP4Q5VZY2 271 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 TXNDC11Q6PKC3 985 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 HACD2Q6Y1H2 254 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PPM1NQ8N819 430 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 TCP10LQ8TDR4 215 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ACTRT2Q8TDY3 377 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PPP2R3CQ969Q6 453 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 OXNAD1Q96HP4 312 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PPANQ9NQ55 473 aaKnown RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 RNF19AQ9NV58 838 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 CHMP2BQ9UQN3 213 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PCDHB7Q9Y5E2 793 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 NPPAP01160 153 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ADRA1AP35348 466 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ATP4BP51164 291 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 GNA12Q03113 381 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PPIGQ13427 754 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 SYPL2Q5VXT5 272 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 UGT3A1Q6NUS8 523 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 KDELC1Q6UW63 502 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 SDCCAG8Q86SQ7 713 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 NUDCD3Q8IVD9 361 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ILKAPQ9H0C8 392 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 TCP11X1B4DZS4 312 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PEX11BO96011 259 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 TEAD1P28347 426 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ARFIP2P53365 341 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 STX3Q13277 289 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 HIC1Q14526 733 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ADAT2Q7Z6V5 191 aaKnown RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 WFIKKN2Q8TEU8 576 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 HSPH1Q92598 858 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 PIWIL1Q96J94 861 aaKnown RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 KCNK16Q96T55 309 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 TRIM56Q9BRZ2 755 aaKnown RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ARHGAP26Q9UNA1 814 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF840PA6NDX5 716 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 MAFKO60675 156 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 WNT3AP56704 352 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 CCDC185Q8N715 623 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 CCNYQ8ND76 341 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF669Q96BR6 464 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 VCX3BQ9H321 246 aa5.94□□□□□ -1.46
PTPRD-206ENST00000397617 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 RBM22Q9NW64 420 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRD-206ENST00000397617 SYCE1LA8MT33 242 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 STMN1P16949 149 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 AMPD1P23109 780 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 RAP1GAPP47736 663 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 SCTRP47872 440 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ARCN1P48444 511 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 PKNOX1P55347 436 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ZFP1Q6P2D0 407 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ADAMTSL2Q86TH1 951 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF641Q96N77 438 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 SELENOSQ9BQE4 189 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 HIPK3Q9H422 1215 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 NMRAL1Q9HBL8 299 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ZDHHC7Q9NXF8 308 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 WBP11Q9Y2W2 641 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 STX16-NPEPL1H3BU86 382 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 STX16O14662 325 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 JCHAINP01591 159 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ALDOAP04075 364 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 GJA8P48165 433 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 POLR2LP62875 67 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 HTRA4P83105 476 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 TMED2Q15363 201 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 KIAA0319Q5VV43 1072 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 KIAA1841Q6NSI8 718 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 LILRA6Q6PI73 481 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 CTU1Q7Z7A3 348 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 LINC01599Q8WXQ3 324 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF514Q96K75 400 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 EMILIN2Q9BXX0 1053 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 MYLK2Q9H1R3 596 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 KCNK9Q9NPC2 374 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 DNAJC28Q9NX36 388 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 COPG2Q9UBF2 871 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 HS3ST2Q9Y278 367 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 INSL6Q9Y581 213 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 TRPM6Q9BX84 2022 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 KANSL1LA0AUZ9 987 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 ZNF197O14709 1029 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 C2P06681 752 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 HNRNPFP52597 415 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 SEC24CP53992 1094 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 GDF10P55107 478 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 SPATA24Q86W54 205 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 MAB21L3Q8N8X9 362 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 CEP70Q8NHQ1 597 aa5.93□□□□□ -1.46
PTPRD-206ENST00000397617 MRPS31Q92665 395 aaKnown RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 MCCC1Q96RQ3 725 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-206ENST00000397617 CDCA3Q99618 268 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms