RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 OCM2P0CE71 109 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 OCMP0CE72 109 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 HGFP14210 728 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CCNB1P14635 433 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 NPR3P17342 541 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ITGALP20701 1170 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SP100P23497 879 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SNX17Q15036 470 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ACSBG2Q5FVE4 666 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 FBXO48Q5FWF7 155 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 PCID2Q5JVF3 399 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 PRAMEF19Q5SWL8 479 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CAMK1DQ8IU85 385 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 UCMAQ8WVF2 138 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 RORBQ92753 470 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 GLT1D1Q96MS3 346 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 MTG1Q9BT17 334 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 C9orf16Q9BUW7 83 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 TMEM245Q9H330 911 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ZNF395Q9H8N7 513 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ATP13A1Q9HD20 1204 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 COPG2Q9UBF2 871 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 RAD54BQ9Y620 910 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 C15orf38-AP3S2A0A0A6YYH1 394 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 MGAT4DA6NG13 374 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 TM7SF2O76062 418 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ATG7O95352 703 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 LYNP07948 512 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SCNN1GP51170 649 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 OAZ1P54368 228 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 MRPL28Q13084 256 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SEMA5AQ13591 1074 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 AARS2Q5JTZ9 985 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SH3PXD2AQ5TCZ1 1133 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ARPINQ7Z6K5 226 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ANKRD52Q8NB46 1076 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 AZIN2Q96A70 460 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 VPS33AQ96AX1 596 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 C18orf25Q96B23 403 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 MFSD3Q96ES6 412 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SMARCD1Q96GM5 515 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 TPD52L3Q96J77 140 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 LENG8Q96PV6 779 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CIB1Q99828 191 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 C1orf50Q9BV19 199 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 GPR88Q9GZN0 384 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ELOVL4Q9GZR5 314 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CAPN10Q9HC96 672 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 GIMAP4Q9NUV9 329 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ETAA1Q9NY74 926 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 FFAR3O14843 346 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 GPR42O15529 346 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 UGT1A9O60656 530 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 TMEM63AO94886 807 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 LYPLA2O95372 231 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 NTRK1P04629 796 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 MBL2P11226 248 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 VAV1P15498 845 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 LBPP18428 481 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 RFX3P48380 749 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ATN1P54259 1190 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 TRIM25Q14258 630 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 NFE2Q16621 373 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 MTX3Q5HYI7 312 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SDHAF4Q5VUM1 108 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 GPR107Q5VW38 600 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ADGRD1Q6QNK2 874 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ZNF572Q7Z3I7 529 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 BBS7Q8IWZ6 715 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 FAM47BQ8NA70 645 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 BPIFB6Q8NFQ5 453 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ACMSDQ8TDX5 336 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 HSFY1Q96LI6 401 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 UGT1A7Q9HAW7 530 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 UGT1A10Q9HAW8 530 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 UGT1A8Q9HAW9 530 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ZFYVE28Q9HCC9 887 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CHRAC1Q9NRG0 131 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 TIPRLO75663 272 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ST8SIA6P61647 398 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 BOP1Q14137 746 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 SPESP1Q6UW49 350 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CATSPERGQ6ZRH7 1159 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 GK5Q6ZS86 529 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 PIWIL4Q7Z3Z4 852 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 CDYL2Q8N8U2 506 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 WDR60Q8WVS4 1066 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 DLG3Q92796 817 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ZNF317Q96PQ6 595 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 VAT1Q99536 393 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 NOL6Q9H6R4 1146 aaKnown RBP10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ENTPD7Q9NQZ7 604 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 ANAPC2Q9UJX6 822 aa10.87□□□□□ -0.67
CCDC40-204ENST00000397545 NFASCO94856 1347 aa10.86□□□□□ -0.67
CCDC40-204ENST00000397545 SIN3BO75182 1162 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms