RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SNX25Q9H3E2 840 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 HIPK3Q9H422 1215 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 PRDM12Q9H4Q4 367 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 XAB2Q9HCS7 855 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 TMEM216Q9P0N5 145 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 CNTN3Q9P232 1028 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 KLHL8Q9P2G9 620 aaPredicted RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 KLHL3Q9UH77 587 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 NUDT5Q9UKK9 219 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 ITGA11Q9UKX5 1188 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 PCDHGB4Q9UN71 923 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 GNEQ9Y223 722 aaKnown RBP5.1□□□□□ -1.59
SSR1-202ENST00000397511 PCDHGB5Q9Y5G0 923 aa5.1□□□□□ -1.59
SSR1-202ENST00000397511 ANKRD34BA5PLL1 514 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 KPNA7A9QM74 516 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CFAP99D6REC4 459 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 PSMD12O00232 456 aaPredicted RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 DCXO43602 365 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 GAS2O43903 313 aaKnown RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 SULT1C4O75897 302 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 PROCP04070 461 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 MYCLP1P12525 358 aaPredicted RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 SMPD1P17405 629 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 UGT1A6P19224 532 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 TGM2P21980 687 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 UGT1A1P22309 533 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 UGT1A4P22310 534 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 VAMP1P23763 118 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ATICP31939 592 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 UGT1A3P35503 534 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 UGT1A5P35504 534 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CPOXP36551 454 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SLC1A6P48664 564 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 COPAP53621 1224 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 BEX3Q00994 111 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CDK18Q07002 472 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 INCA1Q0VD86 236 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ZNF460Q14592 562 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 FBXO47Q5MNV8 452 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 C6orf52Q5T4I8 152 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 PPP2R2DQ66LE6 453 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ATG16L1Q676U5 607 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SLC9A4Q6AI14 798 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 FRA10AC1Q70Z53 315 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CYP2U1Q7Z449 544 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 GPR180Q86V85 440 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 PCYOX1LQ8NBM8 494 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ADCY4Q8NFM4 1077 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ACTRT2Q8TDY3 377 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 PTCD2Q8WV60 388 aaKnown RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 TMIGD2Q96BF3 282 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 TAMM41Q96BW9 452 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ISOC1Q96CN7 298 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ZNF778Q96MU6 729 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SIK2Q9H0K1 926 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ATXN3LQ9H3M9 355 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CYP3A43Q9HB55 503 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 NCKIPSDQ9NZQ3 722 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CDH22Q9UJ99 828 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CDH7Q9ULB5 785 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 POMPQ9Y244 141 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SHROOM3Q8TF72 1996 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 DNAJC25-GNG10A0A024R161 153 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 BCLAF3A2AJT9 711 aaKnown RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 KLF11O14901 512 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 H6PDO95479 791 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SLC25A27O95847 323 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 BPGMP07738 259 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 NCAM1P13591 858 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 AOC1P19801 751 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 TCEA1P23193 301 aaKnown RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 GJA5P36382 358 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SERPINB5P36952 375 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 TUBA1BP68363 451 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 LAMC2Q13753 1193 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 GK3PQ14409 553 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 MOGQ16653 247 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 NOL9Q5SY16 702 aaKnown RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 C9orf57Q5W0N0 161 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 NANOGP8Q6NSW7 305 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 PGM2L1Q6PCE3 622 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 TUBA1AQ71U36 451 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 KBTBD6Q86V97 674 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 BPHLQ86WA6 291 aaPredicted RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 ZNF567Q8N184 647 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SIX5Q8N196 739 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 APPL2Q8NEU8 664 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 OR6J1Q8NGC5 347 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ZNF669Q96BR6 464 aaPredicted RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 FCRL3Q96P31 734 aaPredicted RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 BRINP2Q9C0B6 783 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 KLHL25Q9H0H3 589 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 XPNPEP3Q9NQH7 507 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 ANLNQ9NQW6 1124 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CNGB3Q9NQW8 809 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CHRAC1Q9NRG0 131 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 PIGVQ9NUD9 493 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.09□□□□□ -1.59
SSR1-202ENST00000397511 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.09□□□□□ -1.593e-10■□□□□ 8.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms