RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 GCATO75600 419 aa23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 HOXB2P14652 356 aa23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 ETS1P14921 441 aa23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 NSUN2Q08J23 767 aaKnown RBP eCLIP23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 CWF19L1Q69YN2 538 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 PRUNE1Q86TP1 453 aa23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 ERLEC1Q96DZ1 483 aa23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 POLR1EQ9GZS1 481 aaKnown RBP23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 PCYOX1Q9UHG3 505 aa23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 MMP17Q9ULZ9 603 aa23.94■■□□□ 1.42
TSPAN4-203ENST00000397397 CTAGE15A4D2H0 777 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CHURC1-FNTBB4DL54 471 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 OPHN1O60890 802 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 DCNP07585 359 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CTAGE8P0CG41 777 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 ACTN2P35609 894 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 SCNN1BP51168 640 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 STARD3Q14849 445 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 P3H1Q32P28 736 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 C9orf64Q5T6V5 341 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 ITPRIPL1Q6GPH6 555 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 DPY19L3Q6ZPD9 716 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 ARHGEF18Q6ZSZ5 1173 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 SRLQ86TD4 932 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CTAGE6Q86UF2 777 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CTAGE4Q8IX94 777 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 PLPP6Q8IY26 295 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 OR2A12Q8NGT7 310 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 OR6K2Q8NGY2 324 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CARD6Q9BX69 1037 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 L2HGDHQ9H9P8 463 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 GLOD4Q9HC38 313 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 SCUBE2Q9NQ36 999 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 PRSS16Q9NQE7 514 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 FARP1Q9Y4F1 1045 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 TTC24A2A3L6 582 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 ATG13O75143 517 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 ECEL1O95672 775 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 NFKB1P19838 968 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CD68P34810 354 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 RPS9P46781 194 aaKnown RBP23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CCNHP51946 323 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 DSC2Q02487 901 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 GLIS1Q8NBF1 620 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 NUDCD1Q96RS6 583 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 SEMA3CQ99985 751 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CHRDQ9H2X0 955 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 RSPH14Q9UHP6 348 aa23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 EVLQ9UI08 416 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-203ENST00000397397 CKAP5Q14008 2032 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 F5H423 210 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 GJB3O75712 270 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 GAS8O95995 478 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 KRT14P02533 472 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 ZSCAN5DPP0CG00 497 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 CR2P20023 1033 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 PTGIRP43119 386 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 CSNK1DP48730 415 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 DR1Q01658 176 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 GAS6Q14393 721 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 TRIP13Q15645 432 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 KCTD19Q17RG1 926 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 MYLK3Q32MK0 819 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 BMP8AQ7Z5Y6 402 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 STK40Q8N2I9 435 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 CHST14Q8NCH0 376 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 PBXIP1Q96AQ6 731 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 SLC25A51Q9H1U9 297 aa23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 POLR3BQ9NW08 1133 aaPredicted RBP23.92■■□□□ 1.42
TSPAN4-203ENST00000397397 INSIG1O15503 277 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 POP4O95707 220 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 CES1P23141 567 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 RPL22P35268 128 aaKnown RBP23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 RAD51Q06609 339 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 NIPAL4Q0D2K0 466 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 CAMK2GQ13555 558 aaPredicted RBP23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 PPP1R7Q15435 360 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 ALG1LQ6GMV1 187 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 KIAA1211LQ6NV74 962 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 OR8D1Q8WZ84 308 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 SLCO2A1Q92959 643 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 HEPHQ9BQS7 1158 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 GBA3Q9H227 469 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 ZDHHC6Q9H6R6 413 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 NOD2Q9HC29 1040 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 PCDH9Q9HC56 1237 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 PAK5Q9P286 719 aa23.91■■□□□ 1.42
TSPAN4-203ENST00000397397 A0A1W2PQF6 199 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 PI15O43692 258 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 AOC1P19801 751 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 GKP32189 559 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 AP1S1P61966 158 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 DHX34Q14147 1143 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 ELAVL3Q14576 367 aaKnown RBP23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 NCEH1Q6PIU2 408 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 TMEM92Q6UXU6 159 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 TAB3Q8N5C8 712 aaPredicted RBP23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 ARRDC2Q8TBH0 407 aa23.9■■□□□ 1.42
TSPAN4-203ENST00000397397 TTI1O43156 1089 aa23.89■■□□□ 1.41
TSPAN4-203ENST00000397397 PSMB4P28070 264 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms