RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 TAF1BQ53T94 588 aaPredicted RBP6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 GJC2Q5T442 439 aaPredicted RBP6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 SYPL2Q5VXT5 272 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 NPAS4Q8IUM7 802 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 KLHDC8AQ8IYD2 350 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 PELI3Q8N2H9 469 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 RNF169Q8NCN4 708 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 RP9Q8TA86 221 aaKnown RBP6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 PTPRN2Q92932 1015 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 PDLIM5Q96HC4 596 aaKnown RBP6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 UBXN10Q96LJ8 280 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 FAM83CQ9BQN1 747 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 MED10Q9BTT4 135 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 ZYG11BQ9C0D3 744 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 C12orf65Q9H3J6 166 aaKnown RBP6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 EPB41L1Q9H4G0 881 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 SPATS2LQ9NUQ6 558 aaKnown RBP6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 ZMYM5Q9UJ78 669 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 PLXNA2O75051 1894 aa6.09□□□□□ -1.43
RAPGEF4-203ENST00000397087 ANAPC1Q9H1A4 1944 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 WDR27A2RRH5 827 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 KIF1CO43896 1103 aaKnown RBP6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 EFCAB14O75071 495 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 LRIG2O94898 1065 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 RBP1P09455 135 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 AKAP5P24588 427 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 MLH1P40692 756 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 SLC1A6P48664 564 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 CLCN4P51793 760 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 TRAP1Q12931 704 aaKnown RBP6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 BFSP2Q13515 415 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 ACAP2Q15057 778 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 MAPRE2Q15555 327 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 NOMO2Q5JPE7 1267 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 SLC8B1Q6J4K2 584 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 FAM45BPQ6NSW5 357 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 BNC2Q6ZN30 1099 aaPredicted RBP6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 DENND5BQ6ZUT9 1274 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 KCNMB4Q86W47 210 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 AFAP1L2Q8N4X5 818 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 NPWQ8N729 165 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 NETO2Q8NC67 525 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 C3orf58Q8NDZ4 430 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 CATSPER1Q8NEC5 780 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 FAM45AQ8TCE6 357 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 FAM111AQ96PZ2 611 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 MGME1Q9BQP7 344 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 MEAF6Q9HAF1 191 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 KIF9Q9HAQ2 790 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 MIOSQ9NXC5 875 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 PLK2Q9NYY3 685 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 ZFATQ9P243 1243 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 G3BP2Q9UN86 482 aaKnown RBP6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 ZNF510Q9Y2H8 683 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 MAD1L1Q9Y6D9 718 aa6.09□□□□□ -1.44
RAPGEF4-203ENST00000397087 I6L893 689 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 IFRD1O00458 451 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 FCHO1O14526 889 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 TPP1O14773 563 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PRAMEF11O60813 436 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 TRIM13O60858 407 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 NEBLO76041 1014 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 SAT1P21673 171 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 MGAT1P26572 445 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 MLLT3P42568 568 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 MAP3K7CLP57077 242 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 CRHR2Q13324 411 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PTK2BQ14289 1009 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 FASTKD1Q53R41 847 aaKnown RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 SPATA2LQ8IUW3 424 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PLPP6Q8IY26 295 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 ATPAF2Q8N5M1 289 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PPM1NQ8N819 430 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 RFWD2Q8NHY2 731 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 USP13Q92995 863 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 CFAP36Q96G28 342 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 NUSAP1Q9BXS6 441 aaKnown RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 CADM1Q9BY67 442 aaKnown RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 MARCOQ9UEW3 520 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PADI4Q9UM07 663 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 TBC1D30Q9Y2I9 924 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 HEY1Q9Y5J3 304 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 CCDC78A2IDD5 438 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 E9PAM4 449 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 SPECC1L-ADORA2AF8WAN1 911 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 OLFM2O95897 454 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 HOXB3P14651 431 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 CPA3P15088 417 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 CTGFP29279 349 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 RAB10P61026 200 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 ZBTB17Q13105 803 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 NOGQ13253 232 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PLD1Q13393 1074 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 FXNQ16595 210 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 USP41Q3LFD5 358 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PABPC1LQ4VXU2 614 aaKnown RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 RAB6CQ53S08 254 aa6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 PPP6R3Q5H9R7 873 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF4-203ENST00000397087 ZNF618Q5T7W0 954 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms