RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MGRN1O60291 552 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 PRAMEF11O60813 436 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SOD2P04179 222 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 KCNA4P22459 653 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 GRK2P25098 689 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SERPINB3P29508 390 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 ARCN1P48444 511 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 SLC11A2P49281 568 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 HARS2P49590 506 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 SERPINH1P50454 418 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 RASSF2P50749 326 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SLC20A2Q08357 652 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 C5orf22Q49AR2 442 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SPOUT1Q5T280 376 aaKnown RBP15.14■□□□□ 0.01
CBX3-202ENST00000396386 HECTD3Q5T447 861 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 KLHDC10Q6PID8 442 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 PLD4Q96BZ4 506 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 MYEOVQ96EZ4 313 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 TSNARE1Q96NA8 513 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SIKE1Q9BRV8 207 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 HERC2P3Q9BVR0 1158 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 RETREG1Q9H6L5 497 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 SLC2A6Q9UGQ3 507 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 HAO1Q9UJM8 370 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 TBX21Q9UL17 535 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 KIAA1671Q9BY89 1806 aa15.14■□□□□ 0.01
CBX3-202ENST00000396386 ZNF840PA6NDX5 716 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 SEC24AO95486 1093 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 C2P06681 752 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 APOA4P06727 396 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 MMP2P08253 660 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 KRT16P08779 473 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 CPA3P15088 417 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 ARNTP27540 789 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 GMPRP36959 345 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 ACVRL1P37023 503 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 ETFBP38117 255 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 IRF9Q00978 393 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 ZNF235Q14590 738 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 DLG2Q15700 870 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 SNCBQ16143 134 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 RABGAP1LQ5R372 815 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 TPGS2Q68CL5 300 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 RAPH1Q70E73 1250 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 LCA5Q86VQ0 697 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 C10orf107Q8IVU9 208 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 SREK1Q8WXA9 508 aaKnown RBP15.13■□□□□ 0.01
CBX3-202ENST00000396386 TADA1Q96BN2 335 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 ZNF558Q96NG5 402 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 CLSTN3Q9BQT9 956 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 ZNF395Q9H8N7 513 aaPredicted RBP15.13■□□□□ 0.01
CBX3-202ENST00000396386 MARCOQ9UEW3 520 aaPredicted RBP15.13■□□□□ 0.01
CBX3-202ENST00000396386 TLK1Q9UKI8 766 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 YIPF1Q9Y548 306 aa15.13■□□□□ 0.01
CBX3-202ENST00000396386 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 COCHO43405 550 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 GJB5O95377 273 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 CBX6O95503 412 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 ATP5BP06576 529 aaKnown RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 HMGA1P17096 107 aaKnown RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 SLC6A4P31645 630 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 RFC2P35250 354 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 SLC1A2P43004 574 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 SLC1A6P48664 564 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 POLD2P49005 469 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 CSRP3P50461 194 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 MPP1Q00013 466 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 USP10Q14694 798 aaKnown RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 CTC1Q2NKJ3 1217 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 ZNF470Q6ECI4 717 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 DENND6AQ8IWF6 608 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 PLD6Q8N2A8 252 aaKnown RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 PGBD5Q8N414 524 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 ACVR1CQ8NER5 493 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 GABPB2Q8TAK5 448 aaPredicted RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 ARRDC2Q8TBH0 407 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 PPP4R1Q8TF05 950 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 ZNF599Q96NL3 588 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 TMEM237Q96Q45 408 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 TUBB6Q9BUF5 446 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 C20orf27Q9GZN8 174 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 POLR1EQ9GZS1 481 aaKnown RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 PDFQ9HBH1 243 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 FBXO6Q9NRD1 293 aaPredicted RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 ZNF358Q9NW07 568 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 TRPM5Q9NZQ8 1165 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 NUMBLQ9Y6R0 609 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 OBSL1O75147 1896 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 C2orf71A6NGG8 1288 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 ABLIM3O94929 683 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 T-ENOLP0DO92 83 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 KITP10721 976 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 RALBP11234 206 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
CBX3-202ENST00000396386 AQP5P55064 265 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 CDH4P55283 916 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 DSG1Q02413 1049 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 VEPH1Q14D04 833 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 CNGA3Q16281 694 aa15.12■□□□□ 0.01
CBX3-202ENST00000396386 TSTD2Q5T7W7 516 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms