RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 C5orf42Q9H799 3197 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 PRKCGP05129 697 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 HMBSP08397 361 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 PTPN1P18031 435 aaKnown RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 UGT1A6P19224 532 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 CES1P23141 567 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 PTPN3P26045 913 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 MATKP42679 507 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 TAF6P49848 677 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 RAB27AP51159 221 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 ANKRD20A4Q4UJ75 823 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 ZNF470Q6ECI4 717 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 ESRP1Q6NXG1 681 aaKnown RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 FAM110BQ8TC76 370 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 PPP2R3CQ969Q6 453 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 ATP6V1E2Q96A05 226 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 MMADHCQ9H3L0 296 aaPredicted RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 TRPC7Q9HCX4 862 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 DDX43Q9NXZ2 648 aaKnown RBP9.42□□□□□ -0.9
NDE1-201ENST00000396354 SFMBT1Q9UHJ3 866 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 VCANP13611 3396 aa9.42□□□□□ -0.9
NDE1-201ENST00000396354 HNRNPRO43390 633 aaKnown RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 CA12O43570 354 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 AHCYL1O43865 530 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 PYGLP06737 847 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 FESP07332 822 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 PTPN9P43378 593 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 PGFP49763 221 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CRYBB1P53674 252 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 ROR2Q01974 943 aaKnown RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 PTPRCAPQ14761 206 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 BHLHA9Q7RTU4 235 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 BNIPLQ7Z465 357 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 MYO1HQ8N1T3 1032 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 FBXW8Q8N3Y1 598 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 TRIB2Q92519 343 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 DCUN1D1Q96GG9 259 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 RTP3Q9BQQ7 232 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 FICDQ9BVA6 458 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 FSD1LQ9BXM9 530 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CDH19Q9H159 772 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 VCX3BQ9H321 246 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CAAP1Q9H8G2 361 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 OR12D3Q9UGF7 316 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 DSEQ9UL01 958 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 ST3GAL5Q9UNP4 418 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CRYL1Q9Y2S2 319 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 OR51F1A6NGY5 319 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 KLF11O14901 512 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 LIN7AO14910 233 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 B4GALT3O60512 393 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CLIC3O95833 236 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 POMCP01189 267 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 TFEBP19484 476 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CDH15P55291 814 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 LBRQ14739 615 aaKnown RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 LRRC8BQ6P9F7 803 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SCIMPQ6UWF3 145 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 MARK2Q7KZI7 788 aaKnown RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 FSTL5Q8N475 847 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 SCAMP5Q8TAC9 235 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 PABPC5Q96DU9 382 aaKnown RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SMOQ99835 787 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 GORASP1Q9BQQ3 440 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 WDR41Q9HAD4 459 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 FBRSL1Q9HCM7 1045 aaKnown RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 PRM3Q9NNZ6 103 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 NCF1BA6NI72 391 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 NCF1CA8MVU1 366 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 GABRDO14764 452 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 ITGB1P05556 798 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SETSIPP0DME0 302 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 NCF1P14598 390 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 AOC1P19801 751 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 BDNFP23560 247 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SERPINB8P50452 374 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SCNN1GP51170 649 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 TMED1Q13445 227 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CYLC2Q14093 348 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 C11orf91Q3C1V1 193 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 ZNF789Q5FWF6 425 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 TMCO4Q5TGY1 634 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 LRRC8EQ6NSJ5 796 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CD300LGQ6UXG3 332 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 BNC2Q6ZN30 1099 aaPredicted RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 AGMOQ6ZNB7 445 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 ARCQ7LC44 396 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 PDSS2Q86YH6 399 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CEP97Q8IW35 865 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 GALNT15Q8N3T1 639 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 KYQ8NBH2 561 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SREK1Q8WXA9 508 aaKnown RBP9.41□□□□□ -0.9
NDE1-201ENST00000396354 OLFM3Q96PB7 478 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 KLHL5Q96PQ7 755 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 RBBP8Q99708 897 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 CIB1Q99828 191 aa9.41□□□□□ -0.9
NDE1-201ENST00000396354 SPATA16Q9BXB7 569 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms