RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 UPF3AQ9H1J1 476 aaKnown RBP8.8□□□□□ -1
BDNF-204ENST00000395980 MRPL46Q9H2W6 279 aaKnown RBP8.8□□□□□ -1
BDNF-204ENST00000395980 XPR1Q9UBH6 696 aa8.8□□□□□ -1
BDNF-204ENST00000395980 CNOT6Q9ULM6 557 aaKnown RBP8.8□□□□□ -1
BDNF-204ENST00000395980 HES2Q9Y543 173 aa8.8□□□□□ -1
BDNF-204ENST00000395980 SCN1AP35498 2009 aa8.8□□□□□ -1
BDNF-204ENST00000395980 EVPLQ92817 2033 aa8.8□□□□□ -1
BDNF-204ENST00000395980 A0A087WZ62 844 aa8.8□□□□□ -1
BDNF-204ENST00000395980 UNCXA6NJT0 531 aa8.8□□□□□ -1
BDNF-204ENST00000395980 KCNU1A8MYU2 1149 aa8.8□□□□□ -1
BDNF-204ENST00000395980 CD97P48960 835 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ATP4BP51164 291 aa8.8□□□□□ -1
BDNF-204ENST00000395980 CDH17Q12864 832 aa8.8□□□□□ -1
BDNF-204ENST00000395980 DGKDQ16760 1214 aa8.8□□□□□ -1
BDNF-204ENST00000395980 DCAF4L1Q3SXM0 396 aa8.8□□□□□ -1
BDNF-204ENST00000395980 MTX3Q5HYI7 312 aa8.8□□□□□ -1
BDNF-204ENST00000395980 NAPEPLDQ6IQ20 393 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ERMP1Q7Z2K6 904 aa8.8□□□□□ -1
BDNF-204ENST00000395980 LINC00523Q86TU6 105 aa8.8□□□□□ -1
BDNF-204ENST00000395980 GPR180Q86V85 440 aa8.8□□□□□ -1
BDNF-204ENST00000395980 COLGALT2Q8IYK4 626 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ACVR1CQ8NER5 493 aa8.8□□□□□ -1
BDNF-204ENST00000395980 OR6B3Q8NGW1 331 aa8.8□□□□□ -1
BDNF-204ENST00000395980 KCTD4Q8WVF5 259 aa8.8□□□□□ -1
BDNF-204ENST00000395980 RSPH1Q8WYR4 309 aa8.8□□□□□ -1
BDNF-204ENST00000395980 TMIGD2Q96BF3 282 aa8.8□□□□□ -1
BDNF-204ENST00000395980 HDAC11Q96DB2 347 aa8.8□□□□□ -1
BDNF-204ENST00000395980 CPB2Q96IY4 423 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ZNF512Q96ME7 567 aaPredicted RBP8.8□□□□□ -1
BDNF-204ENST00000395980 SPATA33Q96N06 139 aa8.8□□□□□ -1
BDNF-204ENST00000395980 GPR78Q96P69 363 aa8.8□□□□□ -1
BDNF-204ENST00000395980 MRPL57Q9BQC6 102 aaKnown RBP8.8□□□□□ -1
BDNF-204ENST00000395980 FDXACB1Q9BRP7 624 aaPredicted RBP8.8□□□□□ -1
BDNF-204ENST00000395980 MEAF6Q9HAF1 191 aa8.8□□□□□ -1
BDNF-204ENST00000395980 DUS2Q9NX74 493 aaKnown RBP8.8□□□□□ -1
BDNF-204ENST00000395980 HACL1Q9UJ83 578 aa8.8□□□□□ -1
BDNF-204ENST00000395980 XPO1O14980 1071 aaKnown RBP8.8□□□□□ -1
BDNF-204ENST00000395980 COQ9O75208 318 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ATP5F1P24539 256 aaPredicted RBP8.8□□□□□ -1
BDNF-204ENST00000395980 ABCG1P45844 678 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ZNF135P52742 658 aaPredicted RBP8.8□□□□□ -1
BDNF-204ENST00000395980 RAB10P61026 200 aa8.8□□□□□ -1
BDNF-204ENST00000395980 SCAPQ12770 1279 aa8.8□□□□□ -1
BDNF-204ENST00000395980 CERCAMQ5T4B2 595 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ZBTB49Q6ZSB9 765 aa8.8□□□□□ -1
BDNF-204ENST00000395980 ZUFSPQ96AP4 578 aa8.8□□□□□ -1
BDNF-204ENST00000395980 CCDC126Q96EE4 140 aa8.8□□□□□ -1
BDNF-204ENST00000395980 SLC29A1Q99808 456 aa8.8□□□□□ -1
BDNF-204ENST00000395980 HIPK3Q9H422 1215 aa8.8□□□□□ -1
BDNF-204ENST00000395980 TMEM181Q9P2C4 612 aa8.8□□□□□ -1
BDNF-204ENST00000395980 SNX13Q9Y5W8 968 aa8.8□□□□□ -1
BDNF-204ENST00000395980 A0A087X1B8 175 aa8.79□□□□□ -1
BDNF-204ENST00000395980 KCNK1O00180 336 aa8.79□□□□□ -1
BDNF-204ENST00000395980 PHGDHO43175 533 aaKnown RBP8.79□□□□□ -1
BDNF-204ENST00000395980 USP12O75317 370 aa8.79□□□□□ -1
BDNF-204ENST00000395980 SRP72O76094 671 aaKnown RBP8.79□□□□□ -1
BDNF-204ENST00000395980 APBA3O96018 575 aa8.79□□□□□ -1
BDNF-204ENST00000395980 EGFRP00533 1210 aa8.79□□□□□ -1
BDNF-204ENST00000395980 TCN1P20061 433 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 MYF6P23409 242 aa8.79□□□□□ -1
BDNF-204ENST00000395980 TPP2P29144 1249 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 HMOX2P30519 316 aa8.79□□□□□ -1
BDNF-204ENST00000395980 TKTL1P51854 596 aa8.79□□□□□ -1
BDNF-204ENST00000395980 GALNT1Q10472 559 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 FASTKQ14296 549 aaKnown RBP8.79□□□□□ -1
BDNF-204ENST00000395980 C6orf10Q5SRN2 563 aa8.79□□□□□ -1
BDNF-204ENST00000395980 TREML2Q5T2D2 321 aa8.79□□□□□ -1
BDNF-204ENST00000395980 HMBOX1Q6NT76 420 aa8.79□□□□□ -1
BDNF-204ENST00000395980 C7orf31Q8N865 590 aa8.79□□□□□ -1
BDNF-204ENST00000395980 FAM156AQ8NDB6 213 aa8.79□□□□□ -1
BDNF-204ENST00000395980 ZSCAN18Q8TBC5 510 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 SPPL2BQ8TCT7 592 aa8.79□□□□□ -1
BDNF-204ENST00000395980 ISOC1Q96CN7 298 aa8.79□□□□□ -1
BDNF-204ENST00000395980 MARK4Q96L34 752 aa8.79□□□□□ -1
BDNF-204ENST00000395980 ERAP1Q9NZ08 941 aa8.79□□□□□ -1
BDNF-204ENST00000395980 PSMD12O00232 456 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 TSPAN1O60635 241 aa8.79□□□□□ -1
BDNF-204ENST00000395980 SNRPB2P08579 225 aaKnown RBP8.79□□□□□ -1
BDNF-204ENST00000395980 CD68P34810 354 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 ATXN3P54252 364 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 NME5P56597 212 aa8.79□□□□□ -1
BDNF-204ENST00000395980 SEMA3BQ13214 749 aa8.79□□□□□ -1
BDNF-204ENST00000395980 OLIG2Q13516 323 aa8.79□□□□□ -1
BDNF-204ENST00000395980 TSTD2Q5T7W7 516 aa8.79□□□□□ -1
BDNF-204ENST00000395980 ERO1BQ86YB8 467 aa8.79□□□□□ -1
BDNF-204ENST00000395980 CCDC117Q8IWD4 279 aaPredicted RBP8.79□□□□□ -1
BDNF-204ENST00000395980 MYO1HQ8N1T3 1032 aa8.79□□□□□ -1
BDNF-204ENST00000395980 PCDH20Q8N6Y1 951 aaKnown RBP8.79□□□□□ -1
BDNF-204ENST00000395980 BEST2Q8NFU1 509 aa8.79□□□□□ -1
BDNF-204ENST00000395980 OR2T34Q8NGX1 318 aa8.79□□□□□ -1
BDNF-204ENST00000395980 OR2T3Q8NH03 318 aa8.79□□□□□ -1
BDNF-204ENST00000395980 ROPN1LQ96C74 230 aa8.79□□□□□ -1
BDNF-204ENST00000395980 SGF29Q96ES7 293 aa8.79□□□□□ -1
BDNF-204ENST00000395980 HSPBAP1Q96EW2 488 aa8.79□□□□□ -1
BDNF-204ENST00000395980 SLC2A13Q96QE2 648 aa8.79□□□□□ -1
BDNF-204ENST00000395980 DOK1Q99704 481 aa8.79□□□□□ -1
BDNF-204ENST00000395980 RHOBTB2Q9BYZ6 727 aa8.79□□□□□ -1
BDNF-204ENST00000395980 TRIM15Q9C019 465 aa8.79□□□□□ -1
BDNF-204ENST00000395980 SEMA6AQ9H2E6 1030 aa8.79□□□□□ -1
BDNF-204ENST00000395980 EML4Q9HC35 981 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms