RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 PRKD2Q9BZL6 878 aa13.61□□□□□ -0.23
CLIC1-209ENST00000395892 SMG9Q9H0W8 520 aaKnown RBP13.61□□□□□ -0.23
CLIC1-209ENST00000395892 EPN3Q9H201 632 aa13.61□□□□□ -0.23
CLIC1-209ENST00000395892 SENP1Q9P0U3 644 aa13.61□□□□□ -0.23
CLIC1-209ENST00000395892 PRKAG3Q9UGI9 489 aa13.61□□□□□ -0.23
CLIC1-209ENST00000395892 CLEC4EQ9ULY5 219 aa13.61□□□□□ -0.23
CLIC1-209ENST00000395892 CCL26Q9Y258 94 aa13.61□□□□□ -0.23
CLIC1-209ENST00000395892 RPS6KL1Q9Y6S9 549 aa13.61□□□□□ -0.23
CLIC1-209ENST00000395892 IQANK1A0A1B0GTG1 560 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 E2F8A0AVK6 867 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 LPXNO60711 386 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 SPAG7O75391 227 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 LUC7L3O95232 432 aaKnown RBP13.6□□□□□ -0.23
CLIC1-209ENST00000395892 CKMP06732 381 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 INHBAP08476 426 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 ATXN1LP0C7T5 689 aaKnown RBP13.6□□□□□ -0.23
CLIC1-209ENST00000395892 ERVK-10P10266 1014 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 KRT15P19012 456 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 NUMBP49757 651 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 SEC24CP53992 1094 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 NAB1Q13506 487 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 KCNC3Q14003 757 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 MPP7Q5T2T1 576 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 TEDDM1Q5T9Z0 273 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 FYB2Q5VWT5 728 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 IL31Q6EBC2 164 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 CTAGE3PQ8IX95 158 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 CMTM8Q8IZV2 173 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 CARNMT1Q8N4J0 409 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 USP13Q92995 863 aaPredicted RBP13.6□□□□□ -0.23
CLIC1-209ENST00000395892 ATP2A3Q93084 1043 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 ZSWIM3Q96MP5 696 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 ZNF317Q96PQ6 595 aaPredicted RBP13.6□□□□□ -0.23
CLIC1-209ENST00000395892 SEMA3CQ99985 751 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 MCMBPQ9BTE3 642 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 MRM3Q9HC36 420 aaKnown RBP13.6□□□□□ -0.23
CLIC1-209ENST00000395892 KCNK9Q9NPC2 374 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
CLIC1-209ENST00000395892 SLC17A6Q9P2U8 582 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 UBA2Q9UBT2 640 aaPredicted RBP13.6□□□□□ -0.23
CLIC1-209ENST00000395892 SEPT3Q9UH03 358 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 SH3BP1Q9Y3L3 701 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 MYLKQ15746 1914 aa13.6□□□□□ -0.23
CLIC1-209ENST00000395892 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 TRIM49D1C9J1S8 452 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 SNAP91O60641 907 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 RFPL1O75677 317 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 EPOP01588 193 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 MT-ND3P03897 115 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 SNRPAP09012 282 aaKnown RBP13.59□□□□□ -0.23
CLIC1-209ENST00000395892 TCF3P15923 654 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 ADRA1DP25100 572 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 PLK1P53350 603 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 ITKQ08881 620 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 SLC14A2Q15849 920 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 PACS1Q6VY07 963 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 C4orf33Q8N1A6 199 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 TDRD5Q8NAT2 981 aaKnown RBP13.59□□□□□ -0.23
CLIC1-209ENST00000395892 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.59□□□□□ -0.232e-8■■□□□ 11.4
CLIC1-209ENST00000395892 LEMD2Q8NC56 503 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 SH3RF2Q8TEC5 729 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 ZNF669Q96BR6 464 aaPredicted RBP13.59□□□□□ -0.23
CLIC1-209ENST00000395892 CERS2Q96G23 380 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 GCNAQ96QF7 691 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 TRIB3Q96RU7 358 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 RANBP9Q96S59 729 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 POLR1EQ9GZS1 481 aaKnown RBP13.59□□□□□ -0.23
CLIC1-209ENST00000395892 TREX1Q9NSU2 369 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 ZDHHC7Q9NXF8 308 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 SAMD15Q9P1V8 674 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 LSM7Q9UK45 103 aaKnown RBP13.59□□□□□ -0.23
CLIC1-209ENST00000395892 TCAF1Q9Y4C2 921 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 HCFC2Q9Y5Z7 792 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 PSAT1Q9Y617 370 aa13.59□□□□□ -0.23
CLIC1-209ENST00000395892 CCDC195A0A1B0GUA6 201 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 FAM47DPA6NHR8 397 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 H0Y626 953 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 NEBLO76041 1014 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 ASMTLO95671 621 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 KRT4P19013 534 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 ARNTP27540 789 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 RPA3P35244 121 aaPredicted RBP13.58□□□□□ -0.24
CLIC1-209ENST00000395892 CCNFP41002 786 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 CSKP41240 450 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 ARCN1P48444 511 aaKnown RBP13.58□□□□□ -0.24
CLIC1-209ENST00000395892 SERPINB9P50453 376 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 NEK3P51956 506 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 SLC1A5Q15758 541 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 PCSK7Q16549 785 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 DUSP6Q16828 381 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 SIRPB2Q5JXA9 342 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 ESRP1Q6NXG1 681 aaKnown RBP13.58□□□□□ -0.24
CLIC1-209ENST00000395892 KDELC2Q7Z4H8 507 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 GRASPQ7Z6J2 395 aaPredicted RBP13.58□□□□□ -0.24
CLIC1-209ENST00000395892 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
CLIC1-209ENST00000395892 SLC25A41Q8N5S1 370 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms