RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 TTC23Q5W5X9 447 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 CYP20A1Q6UW02 462 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 USP50Q70EL3 339 aaPredicted RBP17.53■□□□□ 0.4
UBFD1-201ENST00000395878 RP9Q8TA86 221 aaKnown RBP17.53■□□□□ 0.4
UBFD1-201ENST00000395878 PPP3R2Q96LZ3 170 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 SPRTNQ9H040 489 aaPredicted RBP17.53■□□□□ 0.4
UBFD1-201ENST00000395878 MRPL42Q9Y6G3 142 aaKnown RBP17.53■□□□□ 0.4
UBFD1-201ENST00000395878 ITGA2BP08514 1039 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 SMIM10L2AP0DMW4 78 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 SMIM10L2BP0DMW5 78 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 MYBL2P10244 700 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 TFEBP19484 476 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 SNRPD1P62314 119 aaKnown RBP17.53■□□□□ 0.4
UBFD1-201ENST00000395878 ATP1A4Q13733 1029 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 GRIK5Q16478 980 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 GSTA3Q16772 222 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 PTCD3Q96EY7 689 aaKnown RBP17.53■□□□□ 0.4
UBFD1-201ENST00000395878 TSPAN18Q96SJ8 248 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 SPAG4Q9NPE6 437 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 TMEM39AQ9NV64 488 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 GEMIN8Q9NWZ8 242 aaKnown RBP17.53■□□□□ 0.4
UBFD1-201ENST00000395878 BTBD7Q9P203 1132 aa17.53■□□□□ 0.4
UBFD1-201ENST00000395878 HDAC3O15379 428 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 VAV1P15498 845 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 RINLQ6ZS11 566 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 ACE2Q9BYF1 805 aaPredicted RBP17.52■□□□□ 0.4
UBFD1-201ENST00000395878 RNPEPQ9H4A4 650 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 ZDHHC6Q9H6R6 413 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 ANKDD1BA6NHY2 528 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 NBNO60934 754 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 LYPLA2O95372 231 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 GABRB2P47870 512 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 MACC1Q6ZN28 852 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 FBXW8Q8N3Y1 598 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 CENPIQ92674 756 aaPredicted RBP17.52■□□□□ 0.4
UBFD1-201ENST00000395878 PPP1R16AQ96I34 528 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 OSBPL6Q9BZF3 934 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 DIABLOQ9NR28 239 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 SF3B1O75533 1304 aaKnown RBP eCLIP17.52■□□□□ 0.48e-13■■■■■ 68.9
UBFD1-201ENST00000395878 TRIM38O00635 465 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 SGTAO43765 313 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 RPL9P32969 192 aaKnown RBP17.52■□□□□ 0.4
UBFD1-201ENST00000395878 CHN2P52757 468 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 C21orf59P57076 290 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 RPL7AP62424 266 aaKnown RBP17.52■□□□□ 0.4
UBFD1-201ENST00000395878 TNK2Q07912 1038 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 FBXL19Q6PCT2 694 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 RD3Q7Z3Z2 195 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 TRAPPC5Q8IUR0 188 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 LRRC52Q8N7C0 313 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 FBXO30Q8TB52 745 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 MAGEB10Q96LZ2 347 aaPredicted RBP17.52■□□□□ 0.4
UBFD1-201ENST00000395878 RPL26L1Q9UNX3 145 aaKnown RBP17.52■□□□□ 0.4
UBFD1-201ENST00000395878 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
UBFD1-201ENST00000395878 BCLAF3A2AJT9 711 aaKnown RBP17.52■□□□□ 0.39
UBFD1-201ENST00000395878 TGFB1I1O43294 461 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 SERPINA6P08185 405 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 TSPAN19P0C672 248 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 GOT1P17174 413 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 NTSP30990 170 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 MATKP42679 507 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 HLA-DQA1Q5Y7H0 255 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 HEATR4Q86WZ0 1026 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 AGAP11Q8TF27 550 aa17.52■□□□□ 0.39
UBFD1-201ENST00000395878 HMX1Q9NP08 348 aaPredicted RBP17.52■□□□□ 0.39
UBFD1-201ENST00000395878 ST13P5Q8NFI4 369 aaPredicted RBP17.51■□□□□ 0.39
UBFD1-201ENST00000395878 RPS6KA6Q9UK32 745 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 BAZ2BQ9UIF8 2168 aaKnown RBP17.51■□□□□ 0.39
UBFD1-201ENST00000395878 ADCY6O43306 1168 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 TTC27Q6P3X3 843 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 DOK6Q6PKX4 331 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 MYLPFQ96A32 169 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 CYLDQ9NQC7 956 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 NCKAP1Q9Y2A7 1128 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 PEX11AO75192 247 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 ATRNO75882 1429 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 ITGB5P18084 799 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 CXCR2P25025 360 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 GRIA3P42263 894 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 AIF1P55008 147 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 TAS2R40P59535 323 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 LYPLAL1Q5VWZ2 237 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 LIPMQ5VYY2 423 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 KCTD4Q8WVF5 259 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 MTFMTQ96DP5 389 aaKnown RBP17.51■□□□□ 0.39
UBFD1-201ENST00000395878 VMP1Q96GC9 406 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 SLC9A3R1O14745 358 aaPredicted RBP17.51■□□□□ 0.39
UBFD1-201ENST00000395878 ASNA1O43681 348 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 GRM5P41594 1212 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 STX4Q12846 297 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 NRF1Q16656 503 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 METTL3Q86U44 580 aaKnown RBP17.51■□□□□ 0.39
UBFD1-201ENST00000395878 PIK3R5Q8WYR1 880 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 ELMO1Q92556 727 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 HES2Q9Y543 173 aa17.51■□□□□ 0.39
UBFD1-201ENST00000395878 DYTNA2CJ06 578 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 A8MX80 341 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 BNIP2Q12982 314 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms