RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ARSIQ5FYB1 569 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 TMEM164Q5U3C3 297 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 TTC39BQ5VTQ0 682 aaPredicted RBP13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 MACC1Q6ZN28 852 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 TAC4Q86UU9 113 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 CHSY1Q86X52 802 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 APOBEC4Q8WW27 367 aaKnown RBP13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 VOPP1Q96AW1 172 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 EEF2KMTQ96G04 330 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 BTN2A3PQ96KV6 586 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 PSMB7Q99436 277 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 SLC13A1Q9BZW2 595 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 SIRPGQ9P1W8 387 aa13.94□□□□□ -0.18
VCPKMT-201ENST00000395859 IGLON5A6NGN9 336 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 PDXKO00764 312 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 SMAD6O43541 496 aaKnown RBP13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 BNIP3LO60238 219 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 VPS4BO75351 444 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 LEFTY1O75610 366 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 FGF3P11487 239 aaPredicted RBP13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 NR1D1P20393 614 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 IGFALSP35858 605 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 CDC20Q12834 499 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 ZC3H12AQ5D1E8 599 aaKnown RBP13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 TCTN3Q6NUS6 607 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 OGFOD3Q6PK18 319 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 BEND5Q7L4P6 421 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 SRRM1Q8IYB3 904 aaKnown RBP13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 IL22RA1Q8N6P7 574 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 UBR7Q8N806 425 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 KIAA0895Q8NCT3 520 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 TAAR9Q96RI9 348 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 DYRK4Q9NR20 520 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 HESX1Q9UBX0 185 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 VPS4AQ9UN37 437 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 TBC1D30Q9Y2I9 924 aa13.93□□□□□ -0.18
VCPKMT-201ENST00000395859 PVALEFA0A1B0GWK0 134 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 KCNU1A8MYU2 1149 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 F5H5T6 163 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 SPTLC2O15270 562 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 GLB1P16278 677 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 RPL34P49207 117 aaKnown RBP13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 RGS7P49802 495 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 HK3P52790 923 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 B4GALNT1Q00973 533 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 PPARDQ03181 441 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 STK4Q13043 487 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 ELOCQ15369 112 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 CRTC2Q53ET0 693 aaPredicted RBP13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 FAXCQ5TGI0 409 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 SYPL2Q5VXT5 272 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 FBXL22Q6P050 247 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 DPY19L3Q6ZPD9 716 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 CACNA2D3Q8IZS8 1091 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 GRIN3AQ8TCU5 1115 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 TMX3Q96JJ7 454 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 PPP1R9BQ96SB3 815 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 ZSWIM1Q9BR11 485 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 EDEM3Q9BZQ6 932 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 TMEM8AQ9HCN3 771 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 PRDM8Q9NQV8 689 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 IL36AQ9UHA7 158 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 GPR34Q9UPC5 381 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 FARP1Q9Y4F1 1045 aaPredicted RBP13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 B3GALT1Q9Y5Z6 326 aa13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 ZNF106Q9H2Y7 1883 aaKnown RBP13.92□□□□□ -0.18
VCPKMT-201ENST00000395859 PCNX1Q96RV3 2341 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 PIK3R2O00459 728 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 TSPAN6O43657 245 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 KLRC4O43908 158 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 SNAP91O60641 907 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 CNTN5O94779 1100 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 CD2BP2O95400 341 aaKnown RBP13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 ALPIP09923 528 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 RRM1P23921 792 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 L1CAMP32004 1257 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 THOP1P52888 689 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 CENPCQ03188 943 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 ARHGAP44Q17R89 818 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 C5orf22Q49AR2 442 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 LCLAT1Q6UWP7 414 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 NYAP1Q6ZVC0 841 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 PARS2Q7L3T8 475 aaKnown RBP13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 HEATR4Q86WZ0 1026 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 SFTPA2Q8IWL1 248 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 Q8N9G6 341 aaPredicted RBP13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 SCG3Q8WXD2 468 aaKnown RBP13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 TFAP2BQ92481 460 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 PPP1R16AQ96I34 528 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 HSFY1Q96LI6 401 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 CCDC114Q96M63 670 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 DDA1Q9BW61 102 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 BLZF1Q9H2G9 400 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 DONSONQ9NYP3 566 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 GGT7Q9UJ14 662 aa13.91□□□□□ -0.18
VCPKMT-201ENST00000395859 VPS28Q9UK41 221 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms