RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 KLK13Q9UKR3 277 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 NEU3Q9UQ49 428 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 BTBD3Q9Y2F9 522 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 MSRB2Q9Y3D2 182 aa13.98□□□□□ -0.17
CXCL12-205ENST00000395794 A0A1W2PQJ5 194 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 TMEM8BA6NDV4 472 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 WASH4PA8MWX3 477 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 RASA4BC9J798 803 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 EEF2KO00418 725 aaKnown RBP13.97□□□□□ -0.17
CXCL12-205ENST00000395794 DDX3XO00571 662 aaKnown RBP eCLIP13.97□□□□□ -0.17
CXCL12-205ENST00000395794 RASA4O43374 803 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 IGSF6O95976 241 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 PRLRP16471 622 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 HNRNPA2B1P22626 353 aaKnown RBP13.97□□□□□ -0.17
CXCL12-205ENST00000395794 RHOAP61586 193 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 OGDHQ02218 1023 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 SGCGQ13326 291 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 MYLK3Q32MK0 819 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 INO80DQ53TQ3 878 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-205ENST00000395794 ZNF805Q5CZA5 627 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 ERMARDQ5T6L9 678 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 KIAA1161Q6NSJ0 714 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 GATAD2AQ86YP4 633 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 UMODL1-AS1Q8N2C9 162 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 BAHD1Q8TBE0 780 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-205ENST00000395794 FAM174AQ8TBP5 190 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 FNIP1Q8TF40 1166 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 CPLX3Q8WVH0 158 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 SYN2Q92777 582 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-205ENST00000395794 ARHGEF26Q96DR7 871 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 HMCESQ96FZ2 354 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 MYOCQ99972 504 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 TTYH3Q9C0H2 523 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 ACTL7AQ9Y615 435 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 CACNA1EQ15878 2313 aa13.97□□□□□ -0.17
CXCL12-205ENST00000395794 C1QTNF9BB2RNN3 333 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 TSPAN6O43657 245 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 AP1G1O43747 822 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 TMCC1O94876 653 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 CD160O95971 181 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 C1QTNF9P0C862 333 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 THEGLP0DJG4 465 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 EPHA8P29322 1005 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 RXRGP48443 463 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 ZNF135P52742 658 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 NDST2P52849 883 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 ZBED6P86452 979 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 SERINC3Q13530 473 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 NFKBIBQ15653 356 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 CCDC157Q569K6 752 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 PPP6R3Q5H9R7 873 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 E4F1Q66K89 784 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 GDPD4Q6W3E5 623 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 SLCO6A1Q86UG4 719 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 PSTKQ8IV42 348 aaKnown RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 SAP25Q8TEE9 199 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 CALN1Q9BXU9 219 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 SLC17A9Q9BYT1 436 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 GPATCH2LQ9NWQ4 482 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 UBA2Q9UBT2 640 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 LUC7L2Q9Y383 392 aaKnown RBP13.96□□□□□ -0.17
CXCL12-205ENST00000395794 FADS3Q9Y5Q0 445 aa13.96□□□□□ -0.17
CXCL12-205ENST00000395794 NYNRINQ9P2P1 1898 aaKnown RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 FAM221BA6H8Z2 402 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 ARHGAP42A6NI28 874 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 C16orf96A6NNT2 1141 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 LDOC1O95751 146 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 SERPING1P05155 500 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 UGT2B4P06133 528 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 MIPP30301 263 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 GKP32189 559 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 ACAP1Q15027 740 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 ZSCAN23Q3MJ62 389 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 HS1BP3Q53T59 392 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 ATXN7L2Q5T6C5 722 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 SEL1L3Q68CR1 1132 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 RFX8Q6ZV50 586 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 PARS2Q7L3T8 475 aaKnown RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 TTC7BQ86TV6 843 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 DNAAF5Q86Y56 855 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 DCP2Q8IU60 420 aaKnown RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 GALNT15Q8N3T1 639 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 EID2Q8N6I1 236 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 TMEM145Q8NBT3 493 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 KLHL32Q96NJ5 620 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 ISCUQ9H1K1 167 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 NOL6Q9H6R4 1146 aaKnown RBP13.95□□□□□ -0.18
CXCL12-205ENST00000395794 ZWILCHQ9H900 591 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 FZD3Q9NPG1 666 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 IFNKQ9P0W0 207 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 CAPN11Q9UMQ6 739 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 CA5BQ9Y2D0 317 aa13.95□□□□□ -0.18
CXCL12-205ENST00000395794 A6NNZ2 444 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 RNF103O00237 685 aa13.94□□□□□ -0.18
CXCL12-205ENST00000395794 ACACBO00763 2458 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms