RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 RPS12P25398 132 aaKnown RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 KRT20P35900 424 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 SLC5A3P53794 718 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 MTA1Q13330 715 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 ZNF235Q14590 738 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 PLEKHG4Q58EX7 1191 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 RBM48Q5RL73 367 aaKnown RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 OLFML1Q6UWY5 402 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 THAP5Q7Z6K1 395 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TNS4Q8IZW8 715 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 IL31RAQ8NI17 732 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 WNT8BQ93098 351 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 ZUFSPQ96AP4 578 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 RNF145Q96MT1 663 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 CSPG4P5Q96PW8 444 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 NDEL1Q9GZM8 345 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 DDIT4Q9NX09 232 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 RNF112Q9ULX5 631 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 RRN3P2A6NIE6 340 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 CCNE2O96020 404 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 MAPK1P28482 360 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 GRK3P35626 688 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 RPS9P46781 194 aaKnown RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 MERTKQ12866 999 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TRAF3Q13114 568 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 PCLAFQ15004 111 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 REP15Q6BDI9 236 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 FAM45BPQ6NSW5 357 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 PRR23BQ6ZRT6 265 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 FAM43BQ6ZT52 329 aaPredicted RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 NCCRP1Q6ZVX7 275 aaPredicted RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 EEPD1Q7L9B9 569 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 LRRC71Q8N4P6 559 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 FAM45AQ8TCE6 357 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 ELMO3Q96BJ8 720 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 P2RY11Q96G91 374 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 NPAS2Q99743 824 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 WDR55Q9H6Y2 383 aaPredicted RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 CDHR5Q9HBB8 845 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 ZBTB26Q9HCK0 441 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 CYP4F12Q9HCS2 524 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 DKK3Q9UBP4 350 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TBC1D30Q9Y2I9 924 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TCRBV7S3A2A0A539 114 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 UBA6A0AVT1 1052 aaPredicted RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 LACTBL1A8MY62 500 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 H3BSA7 217 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 SLC4A1P02730 911 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 DDX5P17844 614 aaKnown RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 MATKP42679 507 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 MAGEA6P43360 314 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 RGS4P49798 205 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 ATP4BP51164 291 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TLR1Q15399 786 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 MAPRE1Q15691 268 aaKnown RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TEX44Q53QW1 395 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 ZNF470Q6ECI4 717 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 NEPROQ6NW34 567 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 LRRC52Q8N7C0 313 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 KBTBD8Q8NFY9 601 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 RUBCNLQ9H714 662 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 CNGB3Q9NQW8 809 aa8.7□□□□□ -1.02
GABRA1-202ENST00000393943 INTS10Q9NVR2 710 aaKnown RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 TRNAU1APQ9NX07 287 aaKnown RBP8.7□□□□□ -1.02
GABRA1-202ENST00000393943 FGF10O15520 208 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 DHX15O43143 795 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 MYO1DO94832 1006 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TXNP10599 105 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 NCAM1P13591 858 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 XRCC1P18887 633 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ATP6V1B2P21281 511 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 HTR7P34969 479 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 HMGCS2P54868 508 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TMBIM6P55061 237 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CDH8P55286 799 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 HABP4Q5JVS0 413 aaKnown RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ZBTB41Q5SVQ8 909 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CMC1Q7Z7K0 106 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 KRT73Q86Y46 540 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SIGLEC10Q96LC7 697 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 FICDQ9BVA6 458 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TRIM54Q9BYV2 358 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TMEM39BQ9GZU3 492 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 PRDM12Q9H4Q4 367 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ZNF556Q9HAH1 456 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 TRIM17Q9Y577 477 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 H3BNH8 94 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 MLYCDO95822 493 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 KRT6CP48668 564 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 ORC1Q13415 861 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 SPANXN2Q5MJ10 180 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 RSBN1Q5VWQ0 802 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-202ENST00000393943 STEAP4Q687X5 459 aa8.69□□□□□ -1.02
GABRA1-202ENST00000393943 FSTL4Q6MZW2 842 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms