RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ABL2P42684 1182 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 RECQLP46063 649 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-202ENST00000393773 SULT1E1P49888 294 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 PFN3P60673 137 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 EIF2B5Q13144 721 aaKnown RBP15.66■□□□□ 0.1
CHMP3-202ENST00000393773 INO80CQ6PI98 192 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-202ENST00000393773 CRTC1Q6UUV9 634 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 ZNF783Q6ZMS7 281 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 RBM44Q6ZP01 1051 aaKnown RBP15.66■□□□□ 0.1
CHMP3-202ENST00000393773 CLEC14AQ86T13 490 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 ZSCAN30Q86W11 494 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 RBFAQ8N0V3 343 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 GRAMD1AQ96CP6 724 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 LENG8Q96PV6 779 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-202ENST00000393773 TBCBQ99426 244 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 C1QTNF2Q9BXJ5 285 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 WDCPQ9H6R7 721 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 PLCB1Q9NQ66 1216 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHMP3-202ENST00000393773 GGT7Q9UJ14 662 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 SALL4Q9UJQ4 1053 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 STAP1Q9ULZ2 295 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 ITM2BQ9Y287 266 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 ACTL7AQ9Y615 435 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 COL12A1Q99715 3063 aa15.66■□□□□ 0.1
CHMP3-202ENST00000393773 ILVBLA1L0T0 632 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 CPED1A4D0V7 1026 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 BIN1O00499 593 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 TPP1O14773 563 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 TCEA3O75764 348 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 CD160O95971 181 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 PNMA6AP0CW24 399 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-202ENST00000393773 JUNDP17535 347 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 RBMS1P29558 406 aaKnown RBP15.65■□□□□ 0.1
CHMP3-202ENST00000393773 OR1E1P30953 314 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 NR0B2Q15466 257 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 KIAA1614Q5VZ46 1190 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 TRNP1Q6NT89 227 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 BNIPLQ7Z465 357 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 ZDHHC17Q8IUH5 632 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 SLC35F3Q8IY50 421 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 DENND6BQ8NEG7 585 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 LMX1AQ8TE12 382 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 MED8Q96G25 268 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 FEM1CQ96JP0 617 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 C1orf74Q96LT6 269 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 HEPHQ9BQS7 1158 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 LRRC61Q9BV99 259 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 TCEAL2Q9H3H9 227 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-202ENST00000393773 ATP13A1Q9HD20 1204 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 SIX2Q9NPC8 291 aa15.65■□□□□ 0.1
CHMP3-202ENST00000393773 FCF1Q9Y324 198 aaKnown RBP15.65■□□□□ 0.1
CHMP3-202ENST00000393773 IGLON5A6NGN9 336 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 PYCARD-AS1I3L0S3 204 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 FPGTO14772 594 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 MUSKO15146 869 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 GCATO75600 419 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 CLCN1P35523 988 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 SCNN1AP37088 669 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 DEUP1Q05D60 604 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 CLN3Q13286 438 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 SLC25A52Q3SY17 297 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 CARD16Q5EG05 197 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 SMYD5Q6GMV2 418 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 RETSATQ6NUM9 610 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 LRRC31Q6UY01 552 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 GBP6Q6ZN66 633 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 SLC47A2Q86VL8 602 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 ZDHHC6Q9H6R6 413 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 SYNCQ9H7C4 482 aa15.64■□□□□ 0.09
CHMP3-202ENST00000393773 APOBEC3BQ9UH17 382 aaKnown RBP15.64■□□□□ 0.09
CHMP3-202ENST00000393773 FLNCQ14315 2725 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 GTPBP10A4D1E9 387 aaKnown RBP15.63■□□□□ 0.09
CHMP3-202ENST00000393773 TSPAN6O43657 245 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 PON1P27169 355 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 CDH5P33151 784 aaPredicted RBP15.63■□□□□ 0.09
CHMP3-202ENST00000393773 IGFALSP35858 605 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 FLT3P36888 993 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 MLLT3P42568 568 aaPredicted RBP15.63■□□□□ 0.09
CHMP3-202ENST00000393773 SNX16P57768 344 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 GNA12Q03113 381 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 PTK2Q05397 1052 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 C6orf132Q5T0Z8 1188 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 ACBD5Q5T8D3 534 aaPredicted RBP15.63■□□□□ 0.09
CHMP3-202ENST00000393773 OR6K2Q8NGY2 324 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 TPCN2Q8NHX9 752 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 WDR36Q8NI36 951 aaKnown RBP15.63■□□□□ 0.09
CHMP3-202ENST00000393773 ASB12Q8WXK4 309 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 CCDC97Q96F63 343 aaPredicted RBP15.63■□□□□ 0.09
CHMP3-202ENST00000393773 TBATAQ96M53 351 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 IL12RB2Q99665 862 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 SPON2Q9BUD6 331 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 TM6SF2Q9BZW4 377 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 CLMPQ9H6B4 373 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 NEU3Q9UQ49 428 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 PAXBP1Q9Y5B6 917 aa15.63■□□□□ 0.09
CHMP3-202ENST00000393773 CCDC187A0A096LP49 1063 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 CXorf51AA0A1B0GTR3 108 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 LMO7DNF2Z398 122 aa15.62■□□□□ 0.09
CHMP3-202ENST00000393773 F9P00740 461 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms