RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ARL4AP40617 200 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 ABL2P42684 1182 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARSEP51690 589 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 NDST2P52849 883 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 YBEYP58557 167 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 RHOAP61586 193 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC20A2Q08357 652 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 DPYSL3Q14195 570 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZFYVE27Q5T4F4 411 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 SEL1L3Q68CR1 1132 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 TMCO3Q6UWJ1 677 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 RAD9BQ6WBX8 426 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 MINDY1Q8N5J2 469 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 ACRBPQ8NEB7 543 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 TMIEQ8NEW7 156 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 TEKT4Q8WW24 435 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 RFFLQ8WZ73 363 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 RAPGEF5Q92565 580 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 FAM131CQ96AQ9 280 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 KLHL32Q96NJ5 620 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 NCAPGQ9BPX3 1015 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 CALN1Q9BXU9 219 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 RETREG1Q9H6L5 497 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 CAAP1Q9H8G2 361 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 SP110Q9HB58 689 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 FZD3Q9NPG1 666 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 TMEM9BQ9NQ34 198 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 DYRK4Q9NR20 520 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 REXO2Q9Y3B8 237 aaKnown RBP7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 PCDHA13Q9Y5I0 950 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 SDK1Q7Z5N4 2213 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 DOCK4Q8N1I0 1966 aa7.79□□□□□ -1.16
HMGB3P1-201ENST00000393368 A0A0U1RQJ8 604 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 A0A1W2PQU0 124 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZSCAN5CA6NGD5 496 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 EIF3CLB5ME19 914 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 C10orf142B7Z368 130 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ARHGAP33O14559 1287 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SPINT1O43278 529 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 BUB1BO60566 1050 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 RNGTTO60942 597 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PALMO75781 387 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 MTA2O94776 668 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 IGSF6O95976 241 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 WNT1P04628 370 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PRKCGP05129 697 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ADRB3P13945 408 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ITGB7P26010 798 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 MAN1A1P33908 653 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 HOXD12P35452 270 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 NOP2P46087 812 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 HCAR3P49019 387 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ATXN3P54252 364 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 GEMIN4P57678 1058 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SNRPD1P62314 119 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 IL9RQ01113 521 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SEMG2Q02383 582 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SLC10A7Q0GE19 358 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SFSWAPQ12872 951 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PUM1Q14671 1186 aaKnown RBP eCLIP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 LLGL1Q15334 1064 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 HADHQ16836 314 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 KIF19Q2TAC6 998 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 MYLK3Q32MK0 819 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ANKRD20A8PQ5CZ79 823 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PRAMEF14Q5SWL7 426 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 NCBP2-AS2Q69YL0 99 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 KDM7AQ6ZMT4 941 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ERN2Q76MJ5 926 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 DGLUCYQ7Z3D6 616 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PQLC3Q8N755 202 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 KCTD6Q8NC69 237 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 TSEN2Q8NCE0 465 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PCDH19Q8TAB3 1148 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 CEP76Q8TAP6 659 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 FAM71BQ8TC56 605 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ISG20Q96AZ6 181 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 NSMCE3Q96MG7 304 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 GDAP1L1Q96MZ0 367 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PANX2Q96RD6 677 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 EIF3CQ99613 913 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 RTKNQ9BST9 563 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 DESI2Q9BSY9 194 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PCED1AQ9H1Q7 454 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 AASDHPPTQ9NRN7 309 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SUSD2Q9UGT4 822 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 IPO11Q9UI26 975 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SALL4Q9UJQ4 1053 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 ZFR2Q9UPR6 939 aaKnown RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 BOLA1Q9Y3E2 137 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 SNX11Q9Y5W9 270 aa7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 EPN1Q9Y6I3 576 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PTPRZ1P23471 2315 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P1-201ENST00000393368 PCDH15Q96QU1 1955 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 A0A1W2PPC4 97 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 MED19A0JLT2 244 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 LRRD1A4D1F6 860 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 C16orf96A6NNT2 1141 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 H0Y8X5 98 aa7.77□□□□□ -1.17
HMGB3P1-201ENST00000393368 GIPC1O14908 333 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms