RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 TTC4O95801 387 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SYF2O95926 243 aaKnown RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 OR1E1P30953 314 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 GRIA2P42262 883 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 CDH4P55283 916 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 RPS24P62847 133 aaKnown RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 IFI35P80217 286 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 IFFO1Q0D2I5 559 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 GAS6Q14393 721 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SLC29A2Q14542 456 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 KYNUQ16719 465 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 PARP6Q2NL67 630 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 BBS9Q3SYG4 887 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 PARP15Q460N3 678 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 TEX44Q53QW1 395 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 ZBED8Q8IZ13 594 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 PDIK1LQ8N165 341 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SYNPOQ8N3V7 929 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 UHMK1Q8TAS1 419 aaKnown RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 TTC25Q96NG3 672 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 AGAP3Q96P47 875 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SERPINB12Q96P63 405 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 FRMD8Q9BZ67 464 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 CHRDQ9H2X0 955 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SP110Q9HB58 689 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 EIF2B3Q9NR50 452 aaKnown RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 NFS1Q9Y697 457 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 KIAA1549LQ6ZVL6 1849 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 ANTXRLA6NF34 631 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 E7ESA3 106 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 MATN3O15232 486 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 ZBTB24O43167 697 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 TBL1XO60907 577 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 JCHAINP01591 159 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SHBGP04278 402 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 CCNB1P14635 433 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 NFKB1P19838 968 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 MAGEA9P43362 315 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 EIF3BP55884 814 aaKnown RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 KDSRQ06136 332 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 ZNF844Q08AG5 666 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 LRRC32Q14392 662 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 POLD3Q15054 466 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 MSS51Q4VC12 460 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 HP1BP3Q5SSJ5 553 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 TTC39BQ5VTQ0 682 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 GRAMD4Q6IC98 578 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 Q6ZS52 159 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 CHST9Q7L1S5 443 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 ANKMY2Q8IV38 441 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 TERB1Q8NA31 727 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 HJURPQ8NCD3 748 aaPredicted RBP13.79□□□□□ -0.2
PTN-202ENST00000393083 MCUQ8NE86 351 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 TEKT5Q96M29 485 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 RETREG1Q9H6L5 497 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 SLC27A6Q9Y2P4 619 aa13.79□□□□□ -0.2
PTN-202ENST00000393083 ZNF318Q5VUA4 2279 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 KMT2EQ8IZD2 1858 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 A0A1B0GVM2 712 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 TCAF2A6NFQ2 919 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 GOLGA6L10A6NI86 522 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 ALOX15BO15296 676 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 CLDN11O75508 207 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 NEBLO76041 1014 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 APODP05090 189 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 CD68P34810 354 aaPredicted RBP13.78□□□□□ -0.2
PTN-202ENST00000393083 TNFRSF4P43489 277 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 DGKGP49619 791 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 YBEYP58557 167 aaPredicted RBP13.78□□□□□ -0.2
PTN-202ENST00000393083 MTM1Q13496 603 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 FBXO43Q4G163 708 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
PTN-202ENST00000393083 DTWD2Q8NBA8 298 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 WFDC5Q8TCV5 224 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 LMLNQ96KR4 655 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 IL12RB2Q99665 862 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
PTN-202ENST00000393083 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
PTN-202ENST00000393083 TYW5A2RUC4 315 aaKnown RBP13.77□□□□□ -0.21
PTN-202ENST00000393083 PRRT4C9JH25 899 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 RNF40O75150 1001 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 RHOCP08134 193 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 ABHD2P08910 425 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 HLA-FP30511 346 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 ACVRL1P37023 503 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 SARNPP82979 210 aaKnown RBP13.77□□□□□ -0.21
PTN-202ENST00000393083 CDK16Q00536 496 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 MTAPQ13126 283 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 KRT71Q3SY84 523 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 PREPLQ4J6C6 727 aaPredicted RBP13.77□□□□□ -0.21
PTN-202ENST00000393083 DNAJC21Q5F1R6 531 aaKnown RBP13.77□□□□□ -0.21
PTN-202ENST00000393083 PKN3Q6P5Z2 889 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 MAMSTRQ6ZN01 415 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 CAPN12Q6ZSI9 719 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 ZNF534Q76KX8 674 aa13.77□□□□□ -0.21
PTN-202ENST00000393083 KIAA0907Q7Z7F0 614 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms