RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NOS3P29474 1203 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 HOXA10P31260 410 aaPredicted RBP13.26□□□□□ -0.29
LCA5-202ENST00000392959 IRF8Q02556 426 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 PRKG2Q13237 762 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 CAPSQ13938 189 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 ECM1Q16610 540 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 C12orf56Q8IXR9 622 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 GSTCDQ8NEC7 633 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 PROX1Q92786 737 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 PNPLA3Q9NST1 481 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 ARL8BQ9NVJ2 186 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 TMEM216Q9P0N5 145 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 CLUHO75153 1309 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 ATP6AP2A0A1C7CYW4 349 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 H3BMM5 538 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 ATP6AP2O75787 350 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 IGSF6O95976 241 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 FGFR1P11362 822 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 COX7A2P14406 83 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 TNFSF9P41273 254 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 CD86P42081 329 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 FOLH1Q04609 750 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 COX10Q12887 443 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 MFSD10Q14728 455 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 PACS1Q6VY07 963 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 AADATQ8N5Z0 425 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 PCDHB18PQ96TA0 734 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 OSBPL11Q9BXB4 747 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 RNF19AQ9NV58 838 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 GSC2O15499 205 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 NTRK1P04629 796 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 BPGMP07738 259 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 ANXA5P08758 320 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 GRK4P32298 578 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 BNIP2Q12982 314 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 ZNF544Q6NX49 715 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 RBM44Q6ZP01 1051 aaKnown RBP13.26□□□□□ -0.29
LCA5-202ENST00000392959 C10orf107Q8IVU9 208 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 UBASH3BQ8TF42 649 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 REPS1Q96D71 796 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 ETAA1Q9NY74 926 aa13.26□□□□□ -0.29
LCA5-202ENST00000392959 DDX3YO15523 660 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 MLYCDO95822 493 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 TSPAN19P0C672 248 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 RTP1P59025 263 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 C11orf88Q6PI97 169 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 ARHGAP36Q6ZRI8 547 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 ITIH5Q86UX2 942 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 OMA1Q96E52 524 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 KREMEN1Q96MU8 473 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 NDNQ99608 321 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 RAD21L1Q9H4I0 556 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 CYP7B1O75881 506 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 CATP04040 527 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 ADORA2AP29274 412 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 HPCAL1P37235 193 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 USP46P62068 366 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 XIAPP98170 497 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 USP4Q13107 963 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 INTS11Q5TA45 600 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 MFSD14AQ96MC6 490 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 TCF12Q99081 682 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 ACO2Q99798 780 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 MTG1Q9BT17 334 aaPredicted RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 TMEM106CQ9BVX2 250 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 ARMC7Q9H6L4 198 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 PLGRKTQ9HBL7 147 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 DHRS12A0PJE2 317 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 SNPHO15079 494 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 GRIN3BO60391 1043 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 MAFO75444 373 aaPredicted RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 PDE9AO76083 593 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 TSPAN8P19075 237 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 MMP8P22894 467 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 LACTB2Q53H82 288 aaPredicted RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 CDC73Q6P1J9 531 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 CMC1Q7Z7K0 106 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 TLK2Q86UE8 772 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 NMUR2Q9GZQ4 415 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 PNPOQ9NVS9 261 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 PRKAG3Q9UGI9 489 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 R3HDM2Q9Y2K5 976 aaKnown RBP13.25□□□□□ -0.29
LCA5-202ENST00000392959 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 HNRNPLP14866 589 aaKnown RBP eCLIP13.25□□□□□ -0.29
LCA5-202ENST00000392959 CTBP1Q13363 440 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 MACC1Q6ZN28 852 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 PQLC1Q8N2U9 271 aa13.25□□□□□ -0.29
LCA5-202ENST00000392959 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 ULK1O75385 1050 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 LCA5LO95447 670 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 CNPP09543 421 aaKnown RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 NAA20P61599 178 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 BNIP1Q12981 228 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 TAB1Q15750 504 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 SLC5A9Q2M3M2 681 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms