RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 SERINC3Q13530 473 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 ITGA9Q13797 1035 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 USP10Q14694 798 aaKnown RBP18.76■□□□□ 0.59
STRADB-202ENST00000392249 PARP15Q460N3 678 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 ANKRD33Q7Z3H0 272 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 PGBD5Q8N414 524 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 INPP5DQ92835 1189 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 CWH43Q9H720 699 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 ARMCX1Q9P291 453 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 DNMT3LQ9UJW3 386 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 DNAJC16Q9Y2G8 782 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 LAMA2P24043 3122 aaKnown RBP18.75■□□□□ 0.59
STRADB-202ENST00000392249 GJB5O95377 273 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 EFEMP2O95967 443 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 RALBP11234 206 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 SLC6A4P31645 630 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 AVPR1AP37288 418 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 SLC1A2P43004 574 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 RASSF2P50749 326 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 TRIM60Q495X7 471 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 SLC39A5Q6ZMH5 540 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 ATG14Q6ZNE5 492 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 TEX26Q8N6G2 289 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 IGSF21Q96ID5 467 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 WWP1Q9H0M0 922 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 ARNT2Q9HBZ2 717 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 VPS45Q9NRW7 570 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 GJB3O75712 270 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 SEC24AO95486 1093 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 PAMP19021 973 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 ARRB2P32121 409 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 HADHAP40939 763 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 MAPKAPK2P49137 400 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 TUFMP49411 452 aaKnown RBP18.75■□□□□ 0.59
STRADB-202ENST00000392249 SERPINH1P50454 418 aaKnown RBP18.75■□□□□ 0.59
STRADB-202ENST00000392249 IL10RBQ08334 325 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 THOC5Q13769 683 aaKnown RBP18.75■□□□□ 0.59
STRADB-202ENST00000392249 UGP2Q16851 508 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 ZNF470Q6ECI4 717 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 SLC41A1Q8IVJ1 513 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 PIWIL2Q8TC59 973 aaKnown RBP18.75■□□□□ 0.59
STRADB-202ENST00000392249 RAB3IPQ96QF0 476 aaPredicted RBP18.75■□□□□ 0.59
STRADB-202ENST00000392249 NMRAL1Q9HBL8 299 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 NOD2Q9HC29 1040 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 CD248Q9HCU0 757 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 ATP13A1Q9HD20 1204 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 UXTQ9UBK9 157 aaPredicted RBP18.75■□□□□ 0.59
STRADB-202ENST00000392249 TLK1Q9UKI8 766 aa18.75■□□□□ 0.59
STRADB-202ENST00000392249 GRK2P25098 689 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 MNAT1P51948 309 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 LBRQ14739 615 aaKnown RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 ACBD5Q5T8D3 534 aaPredicted RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 KIAA0930Q6ICG6 404 aaPredicted RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 FAM43BQ6ZT52 329 aaPredicted RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 ARRDC2Q8TBH0 407 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 CLSTN3Q9BQT9 956 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 EBF4Q9BQW3 602 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 TBC1D10AQ9BXI6 508 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 PRKD2Q9BZL6 878 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 CPSF2Q9P2I0 782 aaKnown RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 BACE2Q9Y5Z0 518 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 HEATR9A2RTY3 570 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 G3V2L1 256 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 ACSL4O60488 711 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 CSRP3P50461 194 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 YBEYP58557 167 aaPredicted RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 RIPK1Q13546 671 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 SPOUT1Q5T280 376 aaKnown RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 TMCO2Q7Z6W1 182 aaPredicted RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 WDR75Q8IWA0 830 aaKnown RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 RNF168Q8IYW5 571 aaPredicted RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 PTCD3Q96EY7 689 aaKnown RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 CDK5RAP1Q96SZ6 601 aaKnown RBP18.74■□□□□ 0.59
STRADB-202ENST00000392249 SORT1Q99523 831 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 TASP1Q9H6P5 420 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 SAGE1Q9NXZ1 904 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 LNPEPQ9UIQ6 1025 aa18.74■□□□□ 0.59
STRADB-202ENST00000392249 A0A0D9SEW6 157 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 ZNF840PA6NDX5 716 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 PRAMEF11O60813 436 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 SLC35E2BP0CK96 405 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 PTPN4P29074 926 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 CDK18Q07002 472 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 IKBKEQ14164 716 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 ZNF460Q14592 562 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 SNX30Q5VWJ9 437 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 MFSD6LQ8IWD5 586 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 SUGP1Q8IWZ8 645 aaKnown RBP18.73■□□□□ 0.59
STRADB-202ENST00000392249 PPP4R1Q8TF05 950 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 RILPQ96NA2 401 aa18.73■□□□□ 0.59
STRADB-202ENST00000392249 FAM95CA0A1B0GW59 222 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 TK2O00142 265 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 TRAFD1O14545 582 aaPredicted RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 MUSKO15146 869 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 COCHO43405 550 aa18.72■□□□□ 0.59
STRADB-202ENST00000392249 PARNO95453 639 aaKnown RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 HARS2P49590 506 aaKnown RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 ABCE1P61221 599 aaKnown RBP18.72■□□□□ 0.59
STRADB-202ENST00000392249 HECTD3Q5T447 861 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms