RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 BLMHQ13867 455 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 RPE65Q16518 533 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 ME3Q16798 604 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 RETSATQ6NUM9 610 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 C1orf228Q6PIY5 440 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 RINLQ6ZS11 566 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 CCDC146Q8IYE0 955 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 SETD9Q8NE22 299 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 VPS37AQ8NEZ2 397 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 GOLGA1Q92805 767 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 SLC39A13Q96H72 371 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 CTDSP1Q9GZU7 261 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 ZNF700Q9H0M5 742 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 MVB12BQ9H7P6 319 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 DHDHQ9UQ10 334 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 DAAM1Q9Y4D1 1078 aa3.52□□□□□ -1.85
TRAV40-201ENST00000390467 LOC102724159A0A0B4J2E5 919 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 F5H423 210 aaPredicted RBP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 J3KR12 359 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 SERPINI2O75830 405 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 TFRCP02786 760 aaKnown RBP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 SNRNP70P08621 437 aaKnown RBP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 YWHAQP27348 245 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 RBM5P52756 815 aaKnown RBP eCLIP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 ARHGAP8P85298 464 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 SLC18A2Q05940 514 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 POU5F1BQ06416 359 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 CUL4BQ13620 913 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 SLC39A14Q15043 492 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 PWP2Q15269 919 aaKnown RBP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 KIF19Q2TAC6 998 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 KRTAP27-1Q3LI81 207 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 ZNF672Q499Z4 452 aaPredicted RBP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 FBXO43Q4G163 708 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 CCDC38Q502W7 563 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 SETMARQ53H47 684 aaPredicted RBP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 SH2D4BQ5SQS7 431 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 NAPEPLDQ6IQ20 393 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 PATL1Q86TB9 770 aaKnown RBP3.51□□□□□ -1.85
TRAV40-201ENST00000390467 TMPRSS12Q86WS5 348 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 TMC8Q8IU68 726 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 TCP11L2Q8N4U5 519 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 OR6Y1Q8NGX8 325 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 PLCB1Q9NQ66 1216 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 ATP8A2Q9NTI2 1148 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 FBXO40Q9UH90 709 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 SLC45A1Q9Y2W3 748 aa3.51□□□□□ -1.85
TRAV40-201ENST00000390467 NPIPB11E5RHQ5 1161 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 LINC01565O15544 149 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 GAS8-AS1O95177 125 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 ADAP00813 363 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 UMODP07911 640 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 CTPS1P17812 591 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 ADORA2A-AS1P86434 159 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 FAM27E3Q08E93 113 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 MYBPHQ13203 477 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 TRIM14Q14142 442 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 WBP2NLQ6ICG8 309 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 TYW3Q6IPR3 259 aaKnown RBP3.5□□□□□ -1.85
TRAV40-201ENST00000390467 SPICE1Q8N0Z3 855 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 RFLNBQ8N5W9 214 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 ZNF114Q8NC26 417 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 RASSF8Q8NHQ8 419 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 SPATA20Q8TB22 786 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 TBC1D22AQ8WUA7 517 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 RNFT2Q96EX2 444 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 IGSF21Q96ID5 467 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 ADGRG7Q96K78 797 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 TWSG1Q9GZX9 223 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 TMEM51Q9NW97 253 aa3.5□□□□□ -1.85
TRAV40-201ENST00000390467 A0A096LPK6 155 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 A0A0U1RQJ8 604 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 A0A1B0GVM2 712 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 FAM157AC9JC47 383 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 CHL1O00533 1208 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 SEPT4O43236 478 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 BUB3O43684 328 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 HBP1O60381 514 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 GPR12P47775 334 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 CYP4A11Q02928 519 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 DDR1Q08345 913 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 SNTA1Q13424 505 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 CAPSQ13938 189 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 DHX34Q14147 1143 aaKnown RBP3.49□□□□□ -1.85
TRAV40-201ENST00000390467 SF3B4Q15427 424 aaKnown RBP eCLIP3.49□□□□□ -1.85
TRAV40-201ENST00000390467 EFHC1Q5JVL4 640 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 FAM83BQ5T0W9 1011 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 GJB7Q6PEY0 223 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 CCDC174Q6PII3 467 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 GSG1LQ6UXU4 331 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 MEX3BQ6ZN04 569 aaKnown RBP3.49□□□□□ -1.85
TRAV40-201ENST00000390467 ZNF771Q7L3S4 317 aaPredicted RBP3.49□□□□□ -1.85
TRAV40-201ENST00000390467 MON1AQ86VX9 555 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 MUC20Q8N307 709 aaPredicted RBP3.49□□□□□ -1.85
TRAV40-201ENST00000390467 GALNT15Q8N3T1 639 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 PGBD5Q8N414 524 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 MCPH1Q8NEM0 835 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 RFWD2Q8NHY2 731 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 NCSTNQ92542 709 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 RILPL2Q969X0 211 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms