RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 SH3PXD2AQ5TCZ1 1133 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 LPCAT4Q643R3 524 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 TRMT10BQ6PF06 316 aaKnown RBP16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 DDX53Q86TM3 631 aaKnown RBP16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 GPSM1Q86YR5 675 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 RAB42Q8N4Z0 105 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 TMCO5AQ8N6Q1 288 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 TSPAN14Q8NG11 270 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 TMEM169Q96HH4 297 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 DCUN1D5Q9BTE7 237 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 UGT2B28Q9BY64 529 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 ANAPC2Q9UJX6 822 aa16.3■□□□□ 0.2
PTPRN2-201ENST00000389413 PEX10O60683 326 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 IL2P60568 153 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 MILR1Q7Z6M3 343 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 TRPC4APQ8TEL6 797 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 LZICQ8WZA0 190 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 GOLGA2P5Q9HBQ8 144 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 GLOD4Q9HC38 313 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 AP4B1Q9Y6B7 739 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 TCRBV7S3A2A0A539 114 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 PRIM2P49643 509 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 DUSP28Q4G0W2 176 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 NDRG1Q92597 394 aaKnown RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 PTCD3Q96EY7 689 aaKnown RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 ZYG11BQ9C0D3 744 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 CHRAC1Q9NRG0 131 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 IMPAD1Q9NX62 359 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 SMIM35A0A1B0GVV1 85 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 BUD23O43709 281 aaKnown RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 CSH1P0DML2 217 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 CSH2P0DML3 217 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 WNT3AP56704 352 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 BRMS1LQ5PSV4 323 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 PRAMEF19Q5SWL8 479 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 FAM117BQ6P1L5 589 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 MOB2Q70IA6 237 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 HERC6Q8IVU3 1022 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 ZNF567Q8N184 647 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 NKAPQ8N5F7 415 aaKnown RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 OTUB1Q96FW1 271 aaPredicted RBP16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 PIDD1Q9HB75 910 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 IPPQ9Y573 584 aa16.29■□□□□ 0.2
PTPRN2-201ENST00000389413 MZF1P28698 734 aaPredicted RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 TMED10P49755 219 aaKnown RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 MRPS6P82932 125 aaKnown RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 RELL1Q8IUW5 271 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 PYROXD2Q8N2H3 581 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 MRPS26Q9BYN8 205 aaKnown RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 EXOSC4Q9NPD3 245 aaKnown RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 VWA7Q9Y334 891 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 SLC15A5A6NIM6 579 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 SPTLC1O15269 473 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 TSPAN3O60637 253 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 SERPINB1P30740 379 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 HIST2H2ACQ16777 129 aaPredicted RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 VWA5B1Q5TIE3 1220 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 HIST2H2AA3Q6FI13 130 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 RETSATQ6NUM9 610 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 RFWD3Q6PCD5 774 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 DCLRE1AQ6PJP8 1040 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 GPR142Q7Z601 462 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 ITGB6P18564 788 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 GPX6P59796 221 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 OGDHQ02218 1023 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 PRKD1Q15139 912 aaPredicted RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 NEDD8Q15843 81 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 STXBP5Q5T5C0 1151 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 TTC30AQ86WT1 665 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 ITFG1Q8TB96 612 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 FCRL2Q96LA5 508 aaPredicted RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 TRMOQ9BU70 441 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 ATP6AP2A0A1C7CYW4 349 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 DPPA5A6NC42 116 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 ATP6AP2O75787 350 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 BCL10O95999 233 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 CKMP06732 381 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 DEFA1P59665 94 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 DEFA3P59666 94 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 ZNF280AP59817 542 aaPredicted RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 CA9Q16790 459 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 INTS6LQ5JSJ4 861 aaKnown RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 MAGED4Q96JG8 741 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 DDX28Q9NUL7 540 aaKnown RBP16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 DTLQ9NZJ0 730 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 TMEM216Q9P0N5 145 aa16.28■□□□□ 0.2
PTPRN2-201ENST00000389413 PEX11AO75192 247 aa16.27■□□□□ 0.2
PTPRN2-201ENST00000389413 TSPAN8P19075 237 aa16.27■□□□□ 0.2
PTPRN2-201ENST00000389413 SOAT1P35610 550 aa16.27■□□□□ 0.2
PTPRN2-201ENST00000389413 RUNX1T1Q06455 604 aa16.27■□□□□ 0.2
PTPRN2-201ENST00000389413 C16orf72Q14CZ0 275 aa16.27■□□□□ 0.2
PTPRN2-201ENST00000389413 RAP1GAP2Q684P5 730 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms