RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 FGF1P05230 155 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 C8AP07357 584 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 MMP2P08253 660 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 POU2F2P09086 479 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 ERVK-10P10266 1014 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 GABRR2P28476 465 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 MAGEA12P43365 314 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 EPHA5P54756 1037 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 PDE1BQ01064 536 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 FAM182AQ5T1J6 154 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 MROH9Q5TGP6 573 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 RFWD3Q6PCD5 774 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 TMC8Q8IU68 726 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 ZNF557Q8N988 423 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 GDAP1Q8TB36 358 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 ZNF398Q8TD17 642 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 AUTS2Q8WXX7 1259 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 TMA16Q96EY4 203 aaKnown RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 PRICKLE1Q96MT3 831 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 SRPK1Q96SB4 655 aaKnown RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 PAIP2Q9BPZ3 127 aaKnown RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 TCF25Q9BQ70 676 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 FAM167BQ9BTA0 163 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 MCMBPQ9BTE3 642 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 ZNF334Q9HCZ1 680 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 TREX1Q9NSU2 369 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 C20orf96Q9NUD7 363 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 USP15Q9Y4E8 981 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 OBSL1O75147 1896 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 TRAV19A0A0A6YYK7 116 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 C2orf71A6NGG8 1288 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 GREM1O60565 184 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 PIAS1O75925 651 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 KIAA0754O94854 1291 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 TGDSO95455 350 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEC13-203ENST00000383801 HSPA1AP0DMV8 641 aaKnown RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 HSPA1BP0DMV9 641 aaKnown RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 ACVRL1P37023 503 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 CD86P42081 329 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 SERPINB8P50452 374 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 RPS24P62847 133 aaKnown RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 CDK18Q07002 472 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 QPCTQ16769 361 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 ATG16L1Q676U5 607 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 CCDC91Q7Z6B0 441 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 NDUFAF2Q8N183 169 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 CFAP52Q8N1V2 620 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 KIAA1958Q8N8K9 716 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 GBP7Q8N8V2 638 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 USP13Q92995 863 aaPredicted RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 MANSC1Q9H8J5 431 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 ASAH2Q9NR71 780 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 TLR9Q9NR96 1032 aa13.74□□□□□ -0.21
SEC13-203ENST00000383801 PIH1D1Q9NWS0 290 aaKnown RBP13.74□□□□□ -0.21
SEC13-203ENST00000383801 A0A0D9SEW6 157 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 UGT1A9O60656 530 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 EDF1O60869 148 aaKnown RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 LUC7L3O95232 432 aaKnown RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 COL6A2P12110 1019 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 PTPN2P17706 415 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 TPH1P17752 444 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 NMBRP28336 390 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 TYK2P29597 1187 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 FOXN2P32314 431 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 ARCN1P48444 511 aaKnown RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 CLCN4P51793 760 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 SLC20A2Q08357 652 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 MSLNQ13421 630 aaPredicted RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 OLIG2Q13516 323 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 SLC12A1Q13621 1099 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 CCDC153Q494R4 210 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 MPPE1Q53F39 396 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 HSP90AA5PQ58FG0 334 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 PPM1LQ5SGD2 360 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 FYB2Q5VWT5 728 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 RNF43Q68DV7 783 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 FOXR1Q6PIV2 292 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 ELMSAN1Q6PJG2 1045 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 GAREM2Q75VX8 874 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 STRA8Q7Z7C7 330 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 PGBD5Q8N414 524 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 ARL14EPQ8N8R7 260 aaPredicted RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 ACDQ96AP0 544 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 MYEOVQ96EZ4 313 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 IFT43Q96FT9 208 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 SEMA3CQ99985 751 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 ELAC2Q9BQ52 826 aaKnown RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 C19orf43Q9BQ61 176 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 APOL2Q9BQE5 337 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 TRIM56Q9BRZ2 755 aaKnown RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
SEC13-203ENST00000383801 KDM4CQ9H3R0 1056 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 RHOJQ9H4E5 214 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 UGT1A7Q9HAW7 530 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 UGT1A10Q9HAW8 530 aa13.73□□□□□ -0.21
SEC13-203ENST00000383801 UGT1A8Q9HAW9 530 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms