RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KLK10O43240 276 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 AQP9O43315 295 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 ZMPSTE24O75844 475 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 NME1P15531 152 aaKnown RBP23.51■■□□□ 1.35
U2AF1-202ENST00000380276 JUNDP17535 347 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 CDH5P33151 784 aaPredicted RBP23.51■■□□□ 1.35
U2AF1-202ENST00000380276 ACVRL1P37023 503 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 CDO1Q16878 200 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 VWA3BQ502W6 1294 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 GUSBP11Q6P575 273 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 CPA5Q8WXQ8 436 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 IL12RB2Q99665 862 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 SYNDIG1Q9H7V2 258 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 METTL5Q9NRN9 209 aaKnown RBP23.51■■□□□ 1.35
U2AF1-202ENST00000380276 U3KQA8 63 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 KRIT1O00522 736 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 AP1G1O43747 822 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 ABL2P42684 1182 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 LSSP48449 732 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 CFHR1Q03591 330 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 NAA35Q5VZE5 725 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 TRNP1Q6NT89 227 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 FOXR1Q6PIV2 292 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 LEKR1Q6ZMV7 388 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 ZNF354CQ86Y25 554 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 ZNF843Q8N446 348 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 EMC1Q8N766 993 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 MLKLQ8NB16 471 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 VCPIP1Q96JH7 1222 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 THSD1Q9NS62 852 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 WDR70Q9NW82 654 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 DNAI1Q9UI46 699 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 GGT7Q9UJ14 662 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 SATB2Q9UPW6 733 aa23.5■■□□□ 1.35
U2AF1-202ENST00000380276 GCN1Q92616 2671 aaKnown RBP23.5■■□□□ 1.35
U2AF1-202ENST00000380276 C16orf96A6NNT2 1141 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 TSPAN6O43657 245 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 TGM2P21980 687 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 RBMS1P29558 406 aaKnown RBP23.49■■□□□ 1.35
U2AF1-202ENST00000380276 ETFBP38117 255 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 THOP1P52888 689 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 UCNP55089 124 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 POLD3Q15054 466 aaPredicted RBP23.49■■□□□ 1.35
U2AF1-202ENST00000380276 NR0B2Q15466 257 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 SMYD5Q6GMV2 418 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 PHLDB2Q86SQ0 1253 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 HIC2Q96JB3 615 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 TUBGCP2Q9BSJ2 902 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 GPR27Q9NS67 375 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 NCKIPSDQ9NZQ3 722 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 ZNF212Q9UDV6 495 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 HPCAL4Q9UM19 191 aa23.49■■□□□ 1.35
U2AF1-202ENST00000380276 LSM8O95777 96 aaKnown RBP23.48■■□□□ 1.35
U2AF1-202ENST00000380276 UGT2B4P06133 528 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 MMEP08473 750 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 ERVPABLB-1P60509 514 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 C1orf61Q13536 156 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 ISXQ2M1V0 245 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 ARL13BQ3SXY8 428 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 TPRG1LQ5T0D9 272 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 NOP9Q86U38 636 aaKnown RBP23.48■■□□□ 1.35
U2AF1-202ENST00000380276 ZSCAN30Q86W11 494 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 RBFAQ8N0V3 343 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 BTN2A2Q8WVV5 523 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 RAB7BQ96AH8 199 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 PPARGC1AQ9UBK2 798 aaKnown RBP23.48■■□□□ 1.35
U2AF1-202ENST00000380276 SPASTQ9UBP0 616 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 APOBEC3BQ9UH17 382 aaKnown RBP23.48■■□□□ 1.35
U2AF1-202ENST00000380276 KLF15Q9UIH9 416 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 TMEM59LQ9UK28 342 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 CSNK1G3Q9Y6M4 447 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 DOCK4Q8N1I0 1966 aa23.48■■□□□ 1.35
U2AF1-202ENST00000380276 ERVH48-1M5A8F1 160 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 MUSKO15146 869 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 DXOO77932 396 aaKnown RBP23.47■■□□□ 1.35
U2AF1-202ENST00000380276 PLA2G2AP14555 144 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 GEMIN4P57678 1058 aaKnown RBP23.47■■□□□ 1.35
U2AF1-202ENST00000380276 SNRPD1P62314 119 aaKnown RBP23.47■■□□□ 1.35
U2AF1-202ENST00000380276 C15orf59Q2T9L4 293 aaPredicted RBP23.47■■□□□ 1.35
U2AF1-202ENST00000380276 ZNF805Q5CZA5 627 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 LRRC73Q5JTD7 316 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 VPS36Q86VN1 386 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 GLMNQ92990 594 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 ATXN7L3BQ96GX2 97 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 KLHL32Q96NJ5 620 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 LENG8Q96PV6 779 aaPredicted RBP23.47■■□□□ 1.35
U2AF1-202ENST00000380276 KLF6Q99612 283 aaPredicted RBP23.47■■□□□ 1.35
U2AF1-202ENST00000380276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.47■■□□□ 1.35
U2AF1-202ENST00000380276 C1QTNF2Q9BXJ5 285 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 NDFIP2Q9NV92 336 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 OR12D3Q9UGF7 316 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 PTPRQQ9UMZ3 2332 aa23.47■■□□□ 1.35
U2AF1-202ENST00000380276 SPINT1O43278 529 aa23.46■■□□□ 1.35
U2AF1-202ENST00000380276 CD160O95971 181 aa23.46■■□□□ 1.35
U2AF1-202ENST00000380276 RPIAP49247 311 aa23.46■■□□□ 1.35
U2AF1-202ENST00000380276 UBE2HP62256 183 aa23.46■■□□□ 1.35
U2AF1-202ENST00000380276 NOMO3P69849 1222 aa23.46■■□□□ 1.35
U2AF1-202ENST00000380276 RHDQ02161 417 aa23.46■■□□□ 1.35
U2AF1-202ENST00000380276 EIF2B5Q13144 721 aaKnown RBP23.46■■□□□ 1.35
U2AF1-202ENST00000380276 PTK2BQ14289 1009 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms