RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 DHX35Q9H5Z1 703 aaKnown RBP25.08■■□□□ 1.61
TNFRSF4-201ENST00000379236 ERVMER34-1Q9H9K5 563 aa25.08■■□□□ 1.61
TNFRSF4-201ENST00000379236 MRPL47Q9HD33 250 aaKnown RBP25.08■■□□□ 1.61
TNFRSF4-201ENST00000379236 MYO1AQ9UBC5 1043 aa25.08■■□□□ 1.61
TNFRSF4-201ENST00000379236 FRYQ5TBA9 3013 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 EIF3CLB5ME19 914 aaKnown RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 RASA4BC9J798 803 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 RNF103O00237 685 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 EEF2KO00418 725 aaKnown RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 DDX3XO00571 662 aaKnown RBP eCLIP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 NEMP1O14524 444 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 RASA4O43374 803 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 PRPSAP2O60256 369 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 IGSF6O95976 241 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 MYBL1P10243 752 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 HNRNPA2B1P22626 353 aaKnown RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 RHOAP61586 193 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 RPS21P63220 83 aaKnown RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 CCDC157Q569K6 752 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 E4F1Q66K89 784 aaPredicted RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 KIAA1161Q6NSJ0 714 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 DNAAF5Q86Y56 855 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 HMCESQ96FZ2 354 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 FEM1CQ96JP0 617 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 EIF3CQ99613 913 aaKnown RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 GPATCH2LQ9NWQ4 482 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 PCSK1NQ9UHG2 260 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 BZW2Q9Y6E2 419 aaKnown RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 TDRD6O60522 2096 aaKnown RBP25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 EPG5Q9HCE0 2579 aa25.07■■□□□ 1.6
TNFRSF4-201ENST00000379236 TMEM8BA6NDV4 472 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 WASH4PA8MWX3 477 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 TMCC1O94876 653 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 POP4O95707 220 aaKnown RBP25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 ATXN1LP0C7T5 689 aaKnown RBP25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 THEGLP0DJG4 465 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 EPHA8P29322 1005 aaPredicted RBP25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 ZNF284Q2VY69 593 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 ERMARDQ5T6L9 678 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 PARS2Q7L3T8 475 aaKnown RBP25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 SLCO6A1Q86UG4 719 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 RAB7BQ96AH8 199 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 IQCDQ96DY2 449 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 NCAPGQ9BPX3 1015 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 FZD3Q9NPG1 666 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 CA5BQ9Y2D0 317 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 ANKRD36A6QL64 1941 aa25.06■■□□□ 1.6
TNFRSF4-201ENST00000379236 CACNA1BQ00975 2339 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 A0A1W2PQJ5 194 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 TMEM191CA6NGB0 347 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 UGT2B4P06133 528 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 GKP32189 559 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 MYLK3Q32MK0 819 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 INO80DQ53TQ3 878 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 ZNF805Q5CZA5 627 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 ATXN7L2Q5T6C5 722 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 SEL1L3Q68CR1 1132 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 UMODL1-AS1Q8N2C9 162 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 FNIP1Q8TF40 1166 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 CALN1Q9BXU9 219 aa25.05■■□□□ 1.6
TNFRSF4-201ENST00000379236 AKAP13Q12802 2813 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 C16orf96A6NNT2 1141 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 AP1G1O43747 822 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 TPM3P06753 285 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 SERINC3Q13530 473 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 PPP6R3Q5H9R7 873 aaPredicted RBP25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 GDPD4Q6W3E5 623 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 ZSCAN30Q86W11 494 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 SPATS2Q86XZ4 545 aaKnown RBP25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 EID2Q8N6I1 236 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 SAP25Q8TEE9 199 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 CPLX3Q8WVH0 158 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 GATA6Q92908 595 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 ARHGEF26Q96DR7 871 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 KLHL32Q96NJ5 620 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 SNRNP25Q9BV90 132 aaKnown RBP25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 NOL6Q9H6R4 1146 aaKnown RBP25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 UBA2Q9UBT2 640 aaPredicted RBP25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 ZFR2Q9UPR6 939 aaKnown RBP25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 FADS3Q9Y5Q0 445 aa25.04■■□□□ 1.6
TNFRSF4-201ENST00000379236 ARHGAP42A6NI28 874 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 LDOC1O95751 146 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 RXRGP48443 463 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 NDST2P52849 883 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 SGCGQ13326 291 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 SHBQ15464 509 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 TMEM145Q8NBT3 493 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 FAM174AQ8TBP5 190 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 CNDP2Q96KP4 475 aaKnown RBP25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 SLC17A9Q9BYT1 436 aa25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 KMT2BQ9UMN6 2715 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF4-201ENST00000379236 A6NNZ2 444 aa25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 TSPAN6O43657 245 aa25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 SERPING1P05155 500 aa25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 XPAP23025 273 aaPredicted RBP25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 MIPP30301 263 aa25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 ZBED6P86452 979 aa25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 BNIP3Q12983 259 aa25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 NFKBIBQ15653 356 aa25.02■■□□□ 1.6
TNFRSF4-201ENST00000379236 SKOR2Q2VWA4 1001 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms