RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 GNA14O95837 355 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 SLC9A1P19634 815 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 L1CAMP32004 1257 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 PPP1R2P41236 205 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 SERPINH1P50454 418 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 THOP1P52888 689 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 ADKP55263 362 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 NFATC3Q12968 1075 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 EIF2B5Q13144 721 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 SPIDRQ14159 915 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 LRRC73Q5JTD7 316 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 RETSATQ6NUM9 610 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 ENOSF1Q7L5Y1 443 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 SLC26A9Q7LBE3 791 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 JAMLQ86YT9 394 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 DRC7Q8IY82 874 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 WDR36Q8NI36 951 aaKnown RBP18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 PRR11Q96HE9 360 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 NCKIPSDQ9NZQ3 722 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 SPASTQ9UBP0 616 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 HEMK1Q9Y5R4 338 aaPredicted RBP18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 CSNK1G3Q9Y6M4 447 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 NAV2Q8IVL1 2488 aa18.11■□□□□ 0.49
PDLIM4-202ENST00000379018 HECTD1Q9ULT8 2610 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 ZNF821O75541 412 aaPredicted RBP18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 GCATO75600 419 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 ANXA6P08133 673 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 PNMA6AP0CW24 399 aaPredicted RBP18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 BMP6P22004 513 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 KRT9P35527 623 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 ABL2P42684 1182 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 CXCR3P49682 368 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 PAK1Q13153 545 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 CLN3Q13286 438 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 CARD16Q5EG05 197 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 BRMS1LQ5PSV4 323 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 C6orf132Q5T0Z8 1188 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 VPS36Q86VN1 386 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 SLC35F3Q8IY50 421 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 ZNF683Q8IZ20 524 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 PHACTR4Q8IZ21 702 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 PCDH20Q8N6Y1 951 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 TPCN2Q8NHX9 752 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 GLMNQ92990 594 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 TBCBQ99426 244 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 NPY6RQ99463 290 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 CCDC3Q9BQI4 270 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 EPB41L5Q9HCM4 733 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 SIRPGQ9P1W8 387 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 GULP1Q9UBP9 304 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 SALL4Q9UJQ4 1053 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 STAP1Q9ULZ2 295 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 PCDHGA8Q9Y5G5 932 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 DOCK4Q8N1I0 1966 aa18.1■□□□□ 0.49
PDLIM4-202ENST00000379018 CCDC187A0A096LP49 1063 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 CDRT15L2A8MXV6 281 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 WISP1O95388 367 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 RPIAP49247 311 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 SNX16P57768 344 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 PTK2Q05397 1052 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 FAXCQ5TGI0 409 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 IGF2-ASQ6U949 168 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 SNRNP27Q8WVK2 155 aaKnown RBP18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 KLF6Q99612 283 aaPredicted RBP18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 LRRC61Q9BV99 259 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 FAM117AQ9C073 453 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 PDCL3Q9H2J4 239 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 PCDHGC3Q9UN70 934 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 DOLKQ9UPQ8 538 aa18.09■□□□□ 0.49
PDLIM4-202ENST00000379018 DRGXA6NNA5 263 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 C16orf96A6NNT2 1141 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 LZTS3O60299 673 aaPredicted RBP18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 TCEA3O75764 348 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 CELA2BP08218 269 aaPredicted RBP18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 PDX1P52945 283 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 ARF5P84085 180 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 SKOR1P84550 965 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 NFKB2Q00653 900 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 FAM102AQ5T9C2 384 aaPredicted RBP18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 LEKR1Q6ZMV7 388 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 BTN2A2Q8WVV5 523 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 NAT6Q93015 286 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 GRAMD1AQ96CP6 724 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 TIGD1Q96MW7 591 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 CCNL2Q96S94 520 aaPredicted RBP18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 BOCQ9BWV1 1114 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 C1QTNF2Q9BXJ5 285 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 FOXP3Q9BZS1 431 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 SLC13A1Q9BZW2 595 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 CEP44Q9C0F1 390 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 APEX2Q9UBZ4 518 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 AJAP1Q9UKB5 411 aaPredicted RBP18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 PADI4Q9UM07 663 aa18.08■□□□□ 0.48
PDLIM4-202ENST00000379018 ILVBLA1L0T0 632 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 GOLGA8SH3BPF8 625 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 KRIT1O00522 736 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 TPP1O14773 563 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 TSPAN6O43657 245 aa18.07■□□□□ 0.48
PDLIM4-202ENST00000379018 AP1G1O43747 822 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms