RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SLC12A1Q13621 1099 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 TRIM25Q14258 630 aaKnown RBP18.22■□□□□ 0.51
GNE-201ENST00000377902 TTLL4Q14679 1199 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 KYAT1Q16773 422 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 IL31Q6EBC2 164 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 SETD3Q86TU7 594 aaPredicted RBP18.22■□□□□ 0.51
GNE-201ENST00000377902 OSTM1Q86WC4 334 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 HERC6Q8IVU3 1022 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 CNTD1Q8N815 330 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 BEST2Q8NFU1 509 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 WNT8BQ93098 351 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 NT5C3BQ969T7 300 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 ASB9Q96DX5 294 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 RHOJQ9H4E5 214 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 CACNG4Q9UBN1 327 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 SLC2A6Q9UGQ3 507 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 BCAP29Q9UHQ4 241 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 AURKAO14965 403 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 DAB1O75553 588 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 RECQL4O94761 1208 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 KCNA5P22460 613 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 ADARP55265 1226 aaKnown RBP18.22■□□□□ 0.51
GNE-201ENST00000377902 C1QTNF8P60827 252 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 PPIDQ08752 370 aaKnown RBP18.22■□□□□ 0.51
GNE-201ENST00000377902 KCTD2Q14681 263 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 NOL9Q5SY16 702 aaKnown RBP18.22■□□□□ 0.51
GNE-201ENST00000377902 HMBOX1Q6NT76 420 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 APOBEC3FQ8IUX4 373 aaKnown RBP18.22■□□□□ 0.51
GNE-201ENST00000377902 OR9I1Q8NGQ6 314 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 DDI1Q8WTU0 396 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 HSPBAP1Q96EW2 488 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 OTUD5Q96G74 571 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 RBPJLQ9UBG7 517 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 VTI1BQ9UEU0 232 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 ACOT9Q9Y305 439 aa18.22■□□□□ 0.51
GNE-201ENST00000377902 CROCCQ5TZA2 2017 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 SCNN1AP37088 669 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 STT3AP46977 705 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 MAP3K7CLP57077 242 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 SOX4Q06945 474 aaPredicted RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 DALRD3Q5D0E6 543 aaKnown RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 MARCH8Q5T0T0 291 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 ESRP1Q6NXG1 681 aaKnown RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 ARHGAP36Q6ZRI8 547 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 POMKQ9H5K3 350 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 FAM124BQ9H5Z6 455 aaPredicted RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 OLAHQ9NV23 265 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 SFMBT1Q9UHJ3 866 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 YJEFN3A6XGL0 299 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 TIPRLO75663 272 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 APOA4P06727 396 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 TSPAN8P19075 237 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 HSPA13P48723 471 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 RFTN1Q14699 578 aaPredicted RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 HERC3Q15034 1050 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 AGKQ53H12 422 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 DUS1LQ6P1R4 473 aaKnown RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 KLC3Q6P597 504 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 TRIM67Q6ZTA4 783 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 PAQR9Q6ZVX9 377 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 BNIPLQ7Z465 357 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 LRRC52Q8N7C0 313 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 RDH11Q8TC12 318 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 SPPL2BQ8TCT7 592 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 SNRNP27Q8WVK2 155 aaKnown RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 ZNF597Q96LX8 424 aa18.21■□□□□ 0.51
GNE-201ENST00000377902 WDR6Q9NNW5 1121 aaKnown RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 RSL24D1Q9UHA3 163 aaKnown RBP18.21■□□□□ 0.51
GNE-201ENST00000377902 PLXNA1Q9UIW2 1896 aa18.21■□□□□ 0.5
GNE-201ENST00000377902 DNAJC25-GNG10A0A024R161 153 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 BTBD19C9JJ37 291 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 FOXD2O60548 495 aaPredicted RBP18.2■□□□□ 0.5
GNE-201ENST00000377902 H6PDO95479 791 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 TKTL1P51854 596 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 PRAMEP78395 509 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 CREB5Q02930 508 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 LAMC2Q13753 1193 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 B3GALNT2Q8NCR0 500 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 HEXDCQ8WVB3 486 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 ZNF419Q96HQ0 510 aaPredicted RBP18.2■□□□□ 0.5
GNE-201ENST00000377902 LRRC4Q9HBW1 653 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 CHST12Q9NRB3 414 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 CACNA2D2Q9NY47 1150 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 MID2Q9UJV3 735 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 ANKRD6Q9Y2G4 727 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 FAM95CA0A1B0GW59 222 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 ATP6AP2A0A1C7CYW4 349 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 SLC22A2O15244 555 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 ATP6AP2O75787 350 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 NPY2RP49146 381 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 SULT2A1Q06520 285 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 LRP8Q14114 963 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 REP15Q6BDI9 236 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 CARM1Q86X55 608 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 PELI3Q8N2H9 469 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
GNE-201ENST00000377902 PPWD1Q96BP3 646 aaKnown RBP18.2■□□□□ 0.5
GNE-201ENST00000377902 DUSP16Q9BY84 665 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms