RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SAMD11Q96NU1 681 aa10.94□□□□□ -0.66
HIF3A-205ENST00000377670 ADAM28Q9UKQ2 775 aa10.94□□□□□ -0.66
HIF3A-205ENST00000377670 SOX13Q9UN79 622 aa10.94□□□□□ -0.66
HIF3A-205ENST00000377670 NAALADL1Q9UQQ1 740 aa10.94□□□□□ -0.66
HIF3A-205ENST00000377670 BAZ2AQ9UIF9 1905 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 GOLGA8TH3BQL2 631 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF862O60290 1169 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 CBX6O95503 412 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ATP6V1B2P21281 511 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 MPPE1Q53F39 396 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 IRGCQ6NXR0 463 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 AENQ8WTP8 325 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 REPS1Q96D71 796 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 MRPS26Q9BYN8 205 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 TM6SF2Q9BZW4 377 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ELOVL6Q9H5J4 265 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF142P52746 1687 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 URADA6NGE7 173 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 KCNK1O00180 336 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 TRIM24O15164 1050 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 CCR4P51679 360 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 MAPK10P53779 464 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ZNF280AP59817 542 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 CSTF3Q12996 717 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ATAD3BQ5T9A4 648 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ZCCHC8Q6NZY4 707 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 PHYKPLQ8IUZ5 450 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 NXF3Q9H4D5 531 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 NEUROD4Q9HD90 331 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 KPNA4O00629 521 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 GUCY1B2O75343 617 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ANXA6P08133 673 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 TPH1P17752 444 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 TYMPP19971 482 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 MMP13P45452 471 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 HTRA3P83110 453 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 GAD2Q05329 585 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 UNC93AQ86WB7 457 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 MIER2Q8N344 545 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 SUN3Q8TAQ9 357 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 HMGB4Q8WW32 186 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 METTL21AQ8WXB1 218 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 BBS4Q96RK4 519 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 TSPAN18Q96SJ8 248 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 POLR1EQ9GZS1 481 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ACTR8Q9H981 624 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 REXO2Q9Y3B8 237 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 SLC35G4P0C7Q5 338 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 GLRBP48167 497 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 RPL7AP62424 266 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 IFI35P80217 286 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 CES3Q6UWW8 571 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 AGMOQ6ZNB7 445 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ACDQ96AP0 544 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 FEM1CQ96JP0 617 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 FERD3LQ96RJ6 166 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 RSPH9Q9H1X1 276 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 ALKBH4Q9NXW9 302 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
HIF3A-205ENST00000377670 RPS6KL1Q9Y6S9 549 aa10.93□□□□□ -0.66
HIF3A-205ENST00000377670 CLDN5O00501 218 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ZBTB14O43829 449 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 YBX3P16989 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 KCNA5P22460 613 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CYP2F1P24903 491 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 AKT2P31751 481 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CLK2P49760 499 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 RALGDSQ12967 914 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 MMRN1Q13201 1228 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 TTMPQ5BVD1 217 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 SEL1L3Q68CR1 1132 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 PARGQ86W56 976 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 MCEMP1Q8IX19 187 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 SCAIQ8N9R8 606 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 USP7Q93009 1102 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ARHGEF4Q9NR80 690 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CTNNAL1Q9UBT7 734 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 TM9SF1O15321 606 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 VIPP01282 170 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ARF4P18085 180 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 MIPP30301 263 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 MTHFRP42898 656 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 RPL21P46778 160 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 GNA13Q14344 377 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 NEDD8Q15843 81 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CCL14Q16627 93 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ALG11Q2TAA5 492 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ZC3H14Q6PJT7 736 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 CHST9Q7L1S5 443 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 TMPRSS6Q8IU80 811 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ALLCQ8N6M5 410 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ATXN2LQ8WWM7 1075 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 RMND5BQ96G75 393 aaPredicted RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 ZFRQ96KR1 1074 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 KCNS3Q9BQ31 491 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 INTS7Q9NVH2 962 aaKnown RBP10.92□□□□□ -0.66
HIF3A-205ENST00000377670 FZD9O00144 591 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 NR5A2O00482 541 aa10.92□□□□□ -0.66
HIF3A-205ENST00000377670 TNFAIP8O95379 198 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms