RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	PRKD1	Q15139	912 aa	Predicted RBP	11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	TEX44	Q53QW1	395 aa		11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	TRIM67	Q6ZTA4	783 aa		11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	SPATA22	Q8NHS9	363 aa		11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	SLC22A17	Q8WUG5	538 aa		11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	XAB2	Q9HCS7	855 aa	Known RBP	11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	BFAR	Q9NZS9	450 aa		11.86	□□□□□ -0.51
LMO7-204	ENST00000377499	CARNS1	A5YM72	827 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	GOLGA8R	I6L899	631 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ACSL4	O60488	711 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	CTSA	P10619	480 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	VARS	P26640	1264 aa	Known RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	HAL	P42357	657 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	TRPC1	P48995	793 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	NEK2	P51955	445 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ERVFC1	P60507	584 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	GALNT2	Q10471	571 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	IGDCC3	Q8IVU1	814 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	HMCES	Q96FZ2	354 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	SH3GL1	Q99961	368 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	MUC3B	Q9H195	1237 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499		A0A1W2PRU2	124 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	HIDE1	A8MVS5	230 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	PER2	O15055	1255 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	SPAG7	O75391	227 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	AGT	P01019	485 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	BRAF	P15056	766 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	SEPT6	Q14141	434 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	LRRC14	Q15048	493 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ANO4	Q32M45	955 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	CCDC149	Q6ZUS6	474 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	HDAC11	Q96DB2	347 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	SLC39A13	Q96H72	371 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	MPP4	Q96JB8	637 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	NUDCD1	Q96RS6	583 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	CYTH2	Q99418	400 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	KLF6	Q99612	283 aa	Predicted RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	RNF38	Q9H0F5	515 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	COMMD8	Q9NX08	183 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	HBS1L	Q9Y450	684 aa	Known RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	PEX14	O75381	377 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	CCDC166	P0CW27	439 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	RHOQ	P17081	205 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	HMGA1	P17096	107 aa	Known RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	CREM	Q03060	361 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF177	Q13360	481 aa	Predicted RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	RIPK1	Q13546	671 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ZNF235	Q14590	738 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	KLHL38	Q2WGJ6	581 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	LACTB2	Q53H82	288 aa	Predicted RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	RABGAP1L	Q5R372	815 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	MARC1	Q5VT66	337 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	TIGD7	Q6NT04	549 aa	Predicted RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	HS6ST3	Q8IZP7	471 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	C4orf33	Q8N1A6	199 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	MPP5	Q8N3R9	675 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	CARNMT1	Q8N4J0	409 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	SLC25A41	Q8N5S1	370 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	XPO6	Q96QU8	1125 aa	Known RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	INTS9	Q9NV88	658 aa	Known RBP	11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	ATAD3A	Q9NVI7	634 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	NKIRAS1	Q9NYS0	192 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	TRHDE	Q9UKU6	1024 aa		11.85	□□□□□ -0.51
LMO7-204	ENST00000377499	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499		A0A0J9YVX5	310 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	SDR42E2	A6NKP2	422 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499		H0Y626	953 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	MT-CYB	P00156	380 aa	Predicted RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	ATP6V1C1	P21283	382 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	BMPR1A	P36894	532 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	TMED10	P49755	219 aa	Known RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	GEMIN4	P57678	1058 aa	Known RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	LBR	Q14739	615 aa	Known RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	TRPM8	Q7Z2W7	1104 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	PSMG2	Q969U7	264 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	RTP4	Q96DX8	246 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	LSM7	Q9UK45	103 aa	Known RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	RAD54B	Q9Y620	910 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	CPQ	Q9Y646	472 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	CFAP73	A6NFT4	308 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499		J3KR12	359 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	GPX6	P59796	221 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	SPRED2	Q7Z698	418 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	TCEAL8	Q8IYN2	117 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	C1orf74	Q96LT6	269 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	ZBP1	Q9H171	429 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	ASAH2	Q9NR71	780 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	PLK2	Q9NYY3	685 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	IL37	Q9NZH6	218 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	TSC2	P49815	1807 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	TTC24	A2A3L6	582 aa	Predicted RBP	11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	CBX4	O00257	560 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	RFPL2	O75678	378 aa		11.84	□□□□□ -0.51
LMO7-204	ENST00000377499	RHOC	P08134	193 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms