RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 HEPACAM2A8MVW5 462 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ESRRAP11474 423 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 LPOP22079 712 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 DHPSP49366 369 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 PRKAA1Q13131 559 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MRPL10Q7Z7H8 261 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 LRRC49Q8IUZ0 686 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 HDDC3Q8N4P3 179 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 OR4K2Q8NGD2 314 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 PCDH19Q8TAB3 1148 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ACAT2Q9BWD1 397 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 PRKD2Q9BZL6 878 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ACTR8Q9H981 624 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TMEM51Q9NW97 253 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CACNA2D2Q9NY47 1150 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CLIC5Q9NZA1 410 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 BAIAP2L1Q9UHR4 511 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 GGT7Q9UJ14 662 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TLR6Q9Y2C9 796 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CLUHO75153 1309 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 EP400Q96L91 3159 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TMEM120BA0PK00 339 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 KATNA1O75449 491 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 RASSF9O75901 435 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 DGKIO75912 1065 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 PRNPP04156 253 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ACVRL1P37023 503 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ERFP50548 548 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MNAT1P51948 309 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 NRLP54845 237 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MLLT6P55198 1093 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 C21orf59P57076 290 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 INCA1Q0VD86 236 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TCEAL5Q5H9L2 206 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TMEM240Q5SV17 173 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CNSTQ6PJW8 725 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 LVRNQ6Q4G3 990 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 UNC5AQ6ZN44 842 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TMEM173Q86WV6 379 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 RTL3Q8N8U3 475 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 NCLNQ969V3 563 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MYO19Q96H55 970 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 NDNQ99608 321 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TTYH3Q9C0H2 523 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MAGEH1Q9H213 219 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 SYTL2Q9HCH5 934 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 IL1RAPL1Q9NZN1 696 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 SCML2Q9UQR0 700 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 NCANO14594 1321 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 COL4A1P02462 1669 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 SSC5DA1L4H1 1573 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MAGEB16A2A368 324 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TMEM247A6NEH6 219 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TXNDC9O14530 226 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CNTN5O94779 1100 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 DAB2P98082 770 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ECT2LQ008S8 904 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 DBN1Q16643 649 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 ITPRIPL2Q3MIP1 535 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 C16orf46Q6P387 395 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 FAM43BQ6ZT52 329 aaPredicted RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 NLRP9Q7RTR0 991 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MRPL43Q8N983 215 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 TSEN2Q8NCE0 465 aaKnown RBP8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 LRRN4CLQ8ND94 238 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 MDM1Q8TC05 714 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CXorf40BQ96DE9 158 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 HES6Q96HZ4 224 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 HEPHQ9BQS7 1158 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CATSPERZQ9NTU4 200 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 DZANK1Q9NVP4 752 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 GRIN2DO15399 1336 aa8.56□□□□□ -1.04
CRNKL1-202ENST00000377340 CACNB4O00305 520 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 CCNT2O60583 730 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 EIF2S1P05198 315 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 RAP1GDS1P52306 607 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 SESN3P58005 492 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 USP46P62068 366 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 HIST2H2ACQ16777 129 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 C1orf220Q5T0J3 134 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 HIST2H2AA3Q6FI13 130 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 LDB1Q86U70 411 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 SLC26A11Q86WA9 606 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 SUGP1Q8IWZ8 645 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PPFIBP2Q8ND30 876 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 AP2M1Q96CW1 435 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 LRGUKQ96M69 825 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 DPEP2Q9H4A9 486 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 PAK6Q9NQU5 681 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 TCP11X1B4DZS4 312 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 ATP8B1O43520 1251 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 POP4O95707 220 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 HOXB2P14652 356 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 IL1R2P27930 398 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 GRK3P35626 688 aa8.55□□□□□ -1.04
CRNKL1-202ENST00000377340 GTF2A1P52655 376 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms