RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 IQCF5A8MTL0 148 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 PIRO00625 290 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 GSC2O15499 205 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 SRP72O76094 671 aaKnown RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 SIX3O95343 332 aaPredicted RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 F9P00740 461 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 ZNF865P0CJ78 1059 aaPredicted RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 WASHC5Q12768 1159 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 SLC9B1Q4ZJI4 515 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 LRRC74BQ6ZQY2 392 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 DET1Q7L5Y6 550 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 OR13C4Q8NGS5 318 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 RCN3Q96D15 328 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 OR52B2Q96RD2 323 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 C1orf50Q9BV19 199 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 GATA5Q9BWX5 397 aaPredicted RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 RNF186Q9NXI6 227 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 CD274Q9NZQ7 290 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 DCDC2Q9UHG0 476 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 CDH9Q9ULB4 789 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 CNTN6Q9UQ52 1028 aa11.82□□□□□ -0.52
DDR1-227ENST00000376570 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
DDR1-227ENST00000376570 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 ALDOAP04075 364 aaKnown RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 HARS2P49590 506 aaKnown RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 ABCE1P61221 599 aaKnown RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 SP3Q02447 781 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 TUSC3Q13454 348 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 CINPQ9BW66 212 aaPredicted RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 COPS7BQ9H9Q2 264 aaPredicted RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 NCKIPSDQ9NZQ3 722 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 TAGLN3Q9UI15 199 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 MTF2Q9Y483 593 aaPredicted RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 ARL5AQ9Y689 179 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 LRRC14BA6NHZ5 514 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 F5H5T6 163 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 SH3BP5O60239 455 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 PEX11AO75192 247 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 RFPL1O75677 317 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 PGM3O95394 542 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 HLA-DQB2P05538 268 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 ALADP13716 330 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 TFEBP19484 476 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 USP46P62068 366 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 AP2B1P63010 937 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 FLOT2Q14254 428 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 ACSBG2Q5FVE4 666 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 ZNF789Q5FWF6 425 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 RNF43Q68DV7 783 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 GK5Q6ZS86 529 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 STRADAQ7RTN6 431 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 RAB44Q7Z6P3 723 aaPredicted RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 HS6ST3Q8IZP7 471 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 ZMIZ2Q8NF64 920 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 TRPC4APQ8TEL6 797 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 MYLIPQ8WY64 445 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 DDX18Q9NVP1 670 aaKnown RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 MTMR10Q9NXD2 777 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 CDYLQ9Y232 598 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 PTGDR2Q9Y5Y4 395 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 E9PAM4 449 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 FFAR3O14843 346 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 GPR42O15529 346 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 DDHD2O94830 711 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 FBXO21O94952 628 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 HAPLN1P10915 354 aaPredicted RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 CYP2C18P33260 490 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 CD151P48509 253 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 CDH18Q13634 790 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 INTS6LQ5JSJ4 861 aaKnown RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 AFAP1L2Q8N4X5 818 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 GTF3C2Q8WUA4 911 aaPredicted RBP11.81□□□□□ -0.52
DDR1-227ENST00000376570 CNGB3Q9NQW8 809 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 ARHGEF3Q9NR81 526 aa11.81□□□□□ -0.52
DDR1-227ENST00000376570 SRRM3A6NNA2 597 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 AGRPO00253 132 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 PRPF4O43172 522 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■■■□ 22.5
DDR1-227ENST00000376570 PLIN3O60664 434 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 ANXA9O76027 345 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 MYL4P12829 197 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 PSMC3P17980 439 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 ECT2LQ008S8 904 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 FSCBQ5H9T9 825 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 SPDYCQ5MJ68 293 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 PAQR9Q6ZVX9 377 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 ZDHHC17Q8IUH5 632 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 UBR7Q8N806 425 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 SMG9Q9H0W8 520 aaKnown RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 EGFL7Q9UHF1 273 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 STX7O15400 261 aaKnown RBP11.8□□□□□ -0.52
DDR1-227ENST00000376570 TPBGLP0DKB5 382 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 ACRP10323 421 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 PTPN9P43378 593 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 MAMDC4Q6UXC1 1216 aa11.8□□□□□ -0.52
DDR1-227ENST00000376570 OTOP2Q7RTS6 562 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms