RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 DEFB106AQ8N104 65 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 ATP11CQ8NB49 1132 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 TMEM35BQ8NCS4 154 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 C1orf131Q8NDD1 294 aaKnown RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 EPS8L1Q8TE68 723 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 MED8Q96G25 268 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 PRR11Q96HE9 360 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 NAP1L5Q96NT1 182 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 DUSP23Q9BVJ7 150 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 USP29Q9HBJ7 922 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 GPR27Q9NS67 375 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 ASNSD1Q9NWL6 643 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 VPS51Q9UID3 782 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 KLF15Q9UIH9 416 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 NOCTQ9UK39 431 aaKnown RBP13.4□□□□□ -0.26
CLCN6-205ENST00000376492 ENTPD2Q9Y5L3 495 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 SPTA1P02549 2419 aa13.4□□□□□ -0.26
CLCN6-205ENST00000376492 A0A1W2PQC6 194 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 NEMP2A6NFY4 417 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 K7ENP7 123 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 ARHGAP6O43182 974 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 CNTN5O94779 1100 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 GFPT2O94808 682 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 ENDOD1O94919 500 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 LSM8O95777 96 aaKnown RBP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 SLC2A3P11169 496 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 NME1P15531 152 aaKnown RBP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 GABRB2P47870 512 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 HNRNPKP61978 463 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 CDK17Q00537 523 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 KCNC4Q03721 635 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 NME3Q13232 169 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 DEFB133Q30KQ1 61 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 ALFQ53S48 1182 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 TPRG1LQ5T0D9 272 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 ZCCHC8Q6NZY4 707 aaKnown RBP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 INO80CQ6PI98 192 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 FOXR1Q6PIV2 292 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 IGF2-ASQ6U949 168 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 KYAT3Q6YP21 454 aaKnown RBP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 ERN2Q76MJ5 926 aaKnown RBP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 IFT43Q96FT9 208 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 SLC46A1Q96NT5 459 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 SLC2A13Q96QE2 648 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 TNKS2Q9H2K2 1166 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 DYRK4Q9NR20 520 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 TBC1D30Q9Y2I9 924 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 SNX10Q9Y5X0 201 aa13.39□□□□□ -0.27
CLCN6-205ENST00000376492 COL27A1Q8IZC6 1860 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-205ENST00000376492 CDRT15L2A8MXV6 281 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 PAGE1O75459 146 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 CLDN11O75508 207 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 WISP1O95388 367 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 CSF2P04141 144 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 ERBB2P04626 1255 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 RHOCP08134 193 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 MMEP08473 750 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 CHRNB2P17787 502 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 PDX1P52945 283 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 CDR2Q01850 454 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 SLC6A3Q01959 620 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 CLN3Q13286 438 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 PTPN20Q4JDL3 420 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 PERM1Q5SV97 790 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 OTUD1Q5VV17 481 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-205ENST00000376492 TAF3Q5VWG9 929 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 OLFML1Q6UWY5 402 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 RBM44Q6ZP01 1051 aaKnown RBP13.38□□□□□ -0.27
CLCN6-205ENST00000376492 PRICKLE2Q7Z3G6 844 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 PARGQ86W56 976 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-205ENST00000376492 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 HDAC8Q9BY41 377 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 ANLNQ9NQW6 1124 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 EVA1BQ9NVM1 165 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 IL36AQ9UHA7 158 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-205ENST00000376492 WASF2Q9Y6W5 498 aa13.38□□□□□ -0.27
CLCN6-205ENST00000376492 BOD1L1Q8NFC6 3051 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 A0A0D9SEW6 157 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 SPTY2D1-AS1A0A0U1RR47 76 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 I6L893 689 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-205ENST00000376492 MUSKO15146 869 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 SPINT1O43278 529 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 AQP9O43315 295 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 HSF2BPO75031 334 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 LEFTY1O75610 366 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 PAK4O96013 591 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-205ENST00000376492 SERPINC1P01008 464 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 PRNPP04156 253 aa13.37□□□□□ -0.27
CLCN6-205ENST00000376492 CYP1A1P04798 512 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms