RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 HDAC8Q9BY41 377 aa14.5□□□□□ -0.09
CLCN6-203ENST00000376490 SLC32A1Q9H598 525 aa14.5□□□□□ -0.09
CLCN6-203ENST00000376490 TM7SF3Q9NS93 570 aa14.5□□□□□ -0.09
CLCN6-203ENST00000376490 IP6K2Q9UHH9 426 aa14.5□□□□□ -0.09
CLCN6-203ENST00000376490 NCOR2Q9Y618 2525 aa14.5□□□□□ -0.09
CLCN6-203ENST00000376490 SPAARA0A1B0GVQ0 90 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 A0A1W2PQU0 124 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 A0A1W2PR77 199 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 H0Y8X5 98 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 MYO1FO00160 1098 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 PCDH8O95206 1070 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 GSRP00390 522 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 RARAP10276 462 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 AMPD1P23109 780 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 ITGB7P26010 798 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 CTSKP43235 329 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 C21orf59P57076 290 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 FAM193AP78312 1265 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 MAPK8IP2Q13387 824 aaPredicted RBP14.49□□□□□ -0.09
CLCN6-203ENST00000376490 SLC18A3Q16572 532 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 TSR1Q2NL82 804 aaKnown RBP14.49□□□□□ -0.09
CLCN6-203ENST00000376490 FBXL19Q6PCT2 694 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 TP53INP2Q8IXH6 220 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 NIPA2Q8N8Q9 360 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 PPP1R16AQ96I34 528 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 PREBQ9HCU5 417 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 ABHD10Q9NUJ1 306 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 ZNHIT6Q9NWK9 470 aaKnown RBP14.49□□□□□ -0.09
CLCN6-203ENST00000376490 DONSONQ9NYP3 566 aa14.49□□□□□ -0.09
CLCN6-203ENST00000376490 TPX2Q9ULW0 747 aaKnown RBP14.49□□□□□ -0.09
CLCN6-203ENST00000376490 ARHGAP42A6NI28 874 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 C16orf96A6NNT2 1141 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 SLC31A1O15431 190 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 PRAMEF11O60813 436 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 UGT2B4P06133 528 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 TPM1P09493 284 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 ZNF883P0CG24 379 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 ADRB3P13945 408 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 SSR1P43307 286 aaKnown RBP14.48□□□□□ -0.09
CLCN6-203ENST00000376490 NEK3P51956 506 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 RHOAP61586 193 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 DPYSQ14117 519 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 ZNF423Q2M1K9 1284 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 AFMIDQ63HM1 303 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 NAPEPLDQ6IQ20 393 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 NEK5Q6P3R8 708 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 PARS2Q7L3T8 475 aaKnown RBP14.48□□□□□ -0.09
CLCN6-203ENST00000376490 POLNQ7Z5Q5 900 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 CPNE8Q86YQ8 564 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 ARHGAP12Q8IWW6 846 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 NPWQ8N729 165 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 ZNF564Q8TBZ8 553 aaPredicted RBP14.48□□□□□ -0.09
CLCN6-203ENST00000376490 SETD7Q8WTS6 366 aaKnown RBP14.48□□□□□ -0.09
CLCN6-203ENST00000376490 CASKIN2Q8WXE0 1202 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 LRIG1Q96JA1 1093 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 GDAP1L1Q96MZ0 367 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 KLHL32Q96NJ5 620 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 TRIM5Q9C035 493 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 DEF6Q9H4E7 631 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 PDFQ9HBH1 243 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLCN6-203ENST00000376490 ETNK2Q9NVF9 386 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 CTTNBP2NLQ9P2B4 639 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 LHX3Q9UBR4 397 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 UBA2Q9UBT2 640 aaPredicted RBP14.48□□□□□ -0.09
CLCN6-203ENST00000376490 ZFR2Q9UPR6 939 aaKnown RBP14.48□□□□□ -0.09
CLCN6-203ENST00000376490 CA5BQ9Y2D0 317 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 MFHAS1Q9Y4C4 1052 aa14.48□□□□□ -0.09
CLCN6-203ENST00000376490 PTPRBP23467 1997 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 SSU72P8A0A1W2PR75 194 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 H3BRJ5 948 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 TLR4O00206 839 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 DFFAO00273 331 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 INSIG1O15503 277 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 AKR1B10O60218 316 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 MFAP3LO75121 409 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 H2AFZP0C0S5 128 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 PRLRP16471 622 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 ARL4AP40617 200 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 ZNF135P52742 658 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-203ENST00000376490 SIM1P81133 766 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-203ENST00000376490 IL9RQ01113 521 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 SLC25A11Q02978 314 aaKnown RBP14.47□□□□□ -0.09
CLCN6-203ENST00000376490 TBX2Q13207 712 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-203ENST00000376490 STAT4Q14765 748 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 ZNF284Q2VY69 593 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 ATP13A4Q4VNC1 1196 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 SETMARQ53H47 684 aaPredicted RBP14.47□□□□□ -0.09
CLCN6-203ENST00000376490 ZNF805Q5CZA5 627 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 SEL1L3Q68CR1 1132 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 GDPD4Q6W3E5 623 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 DBX2Q6ZNG2 339 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 ARHGAP36Q6ZRI8 547 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 H2AFVQ71UI9 128 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 HORMAD1Q86X24 394 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 NAXDQ8IW45 347 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 MFSD2AQ8NA29 543 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 SKA1Q96BD8 255 aa14.47□□□□□ -0.09
CLCN6-203ENST00000376490 EXOC2Q96KP1 924 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms