RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 PDCD11Q14690 1871 aaKnown RBP14.74□□□□□ -0.05
MSH5-201ENST00000375703 CCL15-CCL14A0A0B4J2E2 113 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 DENRO43583 198 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 ANXA9O76027 345 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 ME2P23368 584 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 GRIA2P42262 883 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 ZNF33AQ06730 810 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 NSUN2Q08J23 767 aaKnown RBP eCLIP14.73□□□□□ -0.05
MSH5-201ENST00000375703 HERC3Q15034 1050 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 TLR1Q15399 786 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 CNGA3Q16281 694 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 CCL15Q16663 113 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 RARS2Q5T160 578 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 USP50Q70EL3 339 aaPredicted RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 TAC4Q86UU9 113 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 CNTN4Q8IWV2 1026 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 PPHLN1Q8NEY8 458 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 ZC3H15Q8WU90 426 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 SMARCD1Q96GM5 515 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 COPS7BQ9H9Q2 264 aaPredicted RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 DMAP1Q9NPF5 467 aaPredicted RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 SLC38A7Q9NVC3 462 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 CDH9Q9ULB4 789 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 NUP205Q92621 2012 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 SBF1O95248 1867 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 PABPC4LP0CB38 370 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 ARCN1P48444 511 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 MFSD6LQ8IWD5 586 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 KLHDC8BQ8IXV7 354 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 KDM1BQ8NB78 822 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 BHLHE22Q8NFJ8 381 aaPredicted RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 STON2Q8WXE9 905 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 LENG1Q96BZ8 264 aaPredicted RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 ELMO2Q96JJ3 720 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 MS4A4AQ96JQ5 239 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 FCRL5Q96RD9 977 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 FICDQ9BVA6 458 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 Q9H521 79 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 COPG1Q9Y678 874 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 PCNTO95613 3336 aa14.73□□□□□ -0.05
MSH5-201ENST00000375703 DICER1Q9UPY3 1922 aaKnown RBP14.73□□□□□ -0.05
MSH5-201ENST00000375703 STX16-NPEPL1H3BU86 382 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 AP1G1O43747 822 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TADA2AO75478 443 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 THP07101 528 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 MYL3P08590 195 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 DPP6P42658 865 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 AFF1P51825 1210 aaKnown RBP14.72□□□□□ -0.05
MSH5-201ENST00000375703 ADGRE1Q14246 886 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TSTD2Q5T7W7 516 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 DENND5AQ6IQ26 1287 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TLK2Q86UE8 772 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 ATPAF2Q8N5M1 289 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 NCSTNQ92542 709 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 SGF29Q96ES7 293 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 GAD1Q99259 594 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 UBE2OQ9C0C9 1292 aaKnown RBP14.72□□□□□ -0.05
MSH5-201ENST00000375703 OSBPL2Q9H1P3 480 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 MRPL46Q9H2W6 279 aaKnown RBP14.72□□□□□ -0.05
MSH5-201ENST00000375703 GLOD4Q9HC38 313 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 NCKIPSDQ9NZQ3 722 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 SLC2A6Q9UGQ3 507 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 SLC45A1Q9Y2W3 748 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 C15orf38-AP3S2A0A0A6YYH1 394 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TRPC5OSA6NMA1 111 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TMEM233B4DJY2 109 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 NPHS1O60500 1241 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 DNAJA2O60884 412 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 RAB27AP51159 221 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 ATXN3P54252 364 aaPredicted RBP14.72□□□□□ -0.05
MSH5-201ENST00000375703 SH2D4BQ5SQS7 431 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 POTEHQ6S545 545 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 KDELC2Q7Z4H8 507 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 ARPINQ7Z6K5 226 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 MARVELD2Q8N4S9 558 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 CEP70Q8NHQ1 597 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TMA16Q96EY4 203 aaKnown RBP14.72□□□□□ -0.05
MSH5-201ENST00000375703 NPAS2Q99743 824 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 VCX3AQ9NNX9 186 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 SLC4A7Q9Y6M7 1214 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 ARNTP27540 789 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 PMLP29590 882 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 SLC12A2P55011 1212 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TAS2R39P59534 338 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 SATL1Q86VE3 508 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 TMEM126BQ8IUX1 230 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 C3orf58Q8NDZ4 430 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 CATSPER1Q8NEC5 780 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 HEXDCQ8WVB3 486 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 IRGQQ8WZA9 623 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 MRPL57Q9BQC6 102 aaKnown RBP14.72□□□□□ -0.05
MSH5-201ENST00000375703 SUDS3Q9H7L9 328 aaPredicted RBP14.72□□□□□ -0.05
MSH5-201ENST00000375703 MIOSQ9NXC5 875 aa14.72□□□□□ -0.05
MSH5-201ENST00000375703 C17orf102A2RUQ5 167 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 TCAF2A6NFQ2 919 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 HAS3O00219 553 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 BCAS2O75934 225 aaPredicted RBP14.71□□□□□ -0.05
MSH5-201ENST00000375703 BDNFP23560 247 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 EPHX2P34913 555 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 SLC1A2P43004 574 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms