RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 FAM189A1O60320 539 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CCNKO75909 580 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CPB1P15086 417 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 RAB2AP61019 212 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 GLB1LQ6UWU2 654 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 UBASH3BQ8TF42 649 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 BIRC8Q96P09 236 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 FAM126AQ9BYI3 521 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 STXBP5LQ9Y2K9 1186 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 DPPA5A6NC42 116 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 RGS10O43665 173 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 GSSP48637 474 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 FBXO47Q5MNV8 452 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 ACTR8Q9H981 624 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 OPTCQ9UBM4 332 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 S100A3P33764 101 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 SOAT1P35610 550 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CSHL1Q14406 222 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 NIPAL1Q6NVV3 410 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 TRIM74Q86UV6 250 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 TRIM73Q86UV7 250 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 LRRC57Q8N9N7 239 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 SPOCK2Q92563 424 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CBWD1Q9BRT8 395 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 FKBP14Q9NWM8 211 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 ACKR2O00590 384 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 AVILO75366 819 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 IKZF3Q9UKT9 509 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CNOT11Q9UKZ1 510 aaKnown RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 PARNO95453 639 aaKnown RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 NOS2P35228 1153 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 ACAP2Q15057 778 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 MFSD7Q6UXD7 560 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CCDC185Q8N715 623 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 RXFP2Q8WXD0 754 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 MKL1Q969V6 931 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 NUSAP1Q9BXS6 441 aaKnown RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 C8BP07358 591 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 THRBP10828 461 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 PABPC1LQ4VXU2 614 aaKnown RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 FAM47BQ8NA70 645 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 POLR1EQ9GZS1 481 aaKnown RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 MROH8Q9H579 483 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 GSTM5P46439 218 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 GRIK3Q13003 919 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 ZBED5Q49AG3 693 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 IRF2BP2Q7Z5L9 587 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 NATD1Q8N6N6 113 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 PSMA8Q8TAA3 256 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 GMIPQ9P107 970 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 BAIAP2Q9UQB8 552 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 SRPRAP08240 638 aaKnown RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CDH4P55283 916 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 CYP2U1Q7Z449 544 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 SYTL5Q8TDW5 730 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 EFHD2Q96C19 240 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-204ENST00000375290 ITCHQ96J02 903 aa10.29□□□□□ -0.76
PTCH1-204ENST00000375290 IL1R1P14778 569 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 GRK4P32298 578 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 GRIA4P48058 902 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 MYBPC3Q14896 1274 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 NRF1Q16656 503 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 DGKKQ5KSL6 1271 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 USP43Q70EL4 1123 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 TARS2Q9BW92 718 aaKnown RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SYNDIG1Q9H7V2 258 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 DERAQ9Y315 318 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SNAP23O00161 211 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF177Q13360 481 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 CAMK2GQ13555 558 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 C15orf52Q6ZUT6 534 aaKnown RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 UTP15Q8TED0 518 aaKnown RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 PCDH18Q9HCL0 1135 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 GNEQ9Y223 722 aaKnown RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 PAPSS1O43252 624 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SCELO95171 688 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 LGALS3BPQ08380 585 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 TEAD4Q15561 434 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 C1orf167Q5SNV9 1468 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 C1orf186Q6ZWK4 172 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 FAM83AQ86UY5 434 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 P2RY8Q86VZ1 359 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SEPHS2Q99611 448 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 FMN2Q9NZ56 1722 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SAE1Q9UBE0 346 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF451Q9Y4E5 1061 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 GRIN2DO15399 1336 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 GNG14A0A1W2PPG7 69 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 OR56A5P0C7T3 313 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 TRIM32Q13049 653 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 MILR1Q7Z6M3 343 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 HPS1Q92902 700 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 OSBPL7Q9BZF2 842 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 GUCA1AP43080 201 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms