RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NFKBIEO00221 500 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 VILLO15195 856 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 NOBOXO60393 691 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 MPOP05164 745 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 TXNP10599 105 aaKnown RBP9.16□□□□□ -0.94
UBR4-201ENST00000375218 CPA3P15088 417 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 UBE2IP63279 158 aaKnown RBP9.16□□□□□ -0.94
UBR4-201ENST00000375218 UBE3AQ05086 875 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 PTK6Q13882 451 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 LRRC32Q14392 662 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 KCNJ12Q14500 433 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 ARHGAP15Q53QZ3 475 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 CCDC157Q569K6 752 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 PXKQ7Z7A4 578 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 CDAN1Q8IWY9 1227 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 HDDC3Q8N4P3 179 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 CNNM3Q8NE01 707 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 PHOSPHO2Q8TCD6 241 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 AUTS2Q8WXX7 1259 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 SLC29A1Q99808 456 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 BRF2Q9HAW0 419 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 ATXN10Q9UBB4 475 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 IL20RAQ9UHF4 553 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 CHD9Q3L8U1 2897 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 YDJCA8MPS7 323 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 AGAP14A8MT82 685 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 EIF3DO15371 548 aaKnown RBP eCLIP9.16□□□□□ -0.944e-8■■□□□ 13
UBR4-201ENST00000375218 CLTAP09496 248 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 BPIFB4P59827 614 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 GRIN1Q05586 938 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 GPR176Q14439 515 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 CDONQ4KMG0 1287 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 TM6SF1Q9BZW5 370 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 SUV39H2Q9H5I1 410 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 NUDT15Q9NV35 164 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 EXTL2Q9UBQ6 330 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 CYP2D6P10635 497 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 RALBP11234 206 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 TSHRP16473 764 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 BPIP17213 487 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 TAP1Q03518 808 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 UBE3CQ15386 1083 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 SEC23AQ15436 765 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 CEP85LQ5SZL2 805 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 LIN9Q5TKA1 542 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 FAM111BQ6SJ93 734 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 KCNT2Q6UVM3 1135 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 FSIP1Q8NA03 581 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 HASPINQ8TF76 798 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 SDR42E1Q8WUS8 393 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 TMEM41AQ96HV5 264 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 PARVAQ9NVD7 372 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 PSAT1Q9Y617 370 aa9.16□□□□□ -0.94
UBR4-201ENST00000375218 MEI4A8MW99 385 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 GPAA1O43292 621 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 XYLBO75191 536 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 NAGAP17050 411 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 SYT1P21579 422 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 PSMA5P28066 241 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 ARL3P36405 182 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 PTPN9P43378 593 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 CASP4P49662 377 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 ASIC1P78348 528 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 PTRHD1Q6GMV3 140 aaKnown RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 TLK2Q86UE8 772 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 SLC38A6Q8IZM9 456 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 CEP112Q8N8E3 955 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 BBS1Q8NFJ9 593 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 JADE3Q92613 823 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 AZIN2Q96A70 460 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 PELOQ9BRX2 385 aaKnown RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 PARD6GQ9BYG4 376 aaPredicted RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 TTYH3Q9C0H2 523 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 TDP1Q9NUW8 608 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 ARMCX3Q9UH62 379 aaPredicted RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 A0A0G2JMZ2 1700 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 LRRC37A2A6NM11 1700 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 GPR171O14626 319 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 PDGFBP01127 241 aaPredicted RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 ITGB3P05106 788 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 LIPFP07098 398 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 CCDC166P0CW27 439 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 TNFRSF8P28908 595 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 HLA-FP30511 346 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 ALDH1A3P47895 512 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 ZNF81P51508 661 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 CYP4F2P78329 520 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 MANEAQ5SRI9 462 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 SHEQ5VZ18 495 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 RANBP10Q6VN20 620 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 ANO5Q75V66 913 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 OFCC1Q8IZS5 231 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 SCAIQ8N9R8 606 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 RBM12Q9NTZ6 932 aaKnown RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 PCDH17O14917 1159 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 B3GALT2O43825 422 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 SLC11A1P49279 550 aa9.15□□□□□ -0.94
UBR4-201ENST00000375218 KIF23Q02241 960 aaPredicted RBP9.15□□□□□ -0.94
UBR4-201ENST00000375218 LMAN2Q12907 356 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms