RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 ERV3-1Q14264 604 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 ZRSR2Q15696 482 aaKnown RBP10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 AMZ1Q400G9 498 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 SPOPLQ6IQ16 392 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 GKN2Q86XP6 184 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 NRSN1Q8IZ57 195 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 AGBL5Q8NDL9 886 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 DENND6BQ8NEG7 585 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 TMIEQ8NEW7 156 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 RNF34Q969K3 372 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 AZIN2Q96A70 460 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 RTP4Q96DX8 246 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 C19orf60Q96EN9 201 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 FEM1CQ96JP0 617 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 DDX50Q9BQ39 737 aaKnown RBP10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 C1QTNF2Q9BXJ5 285 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 HDAC8Q9BY41 377 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 TRIM55Q9BYV6 548 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 OCIAD1Q9NX40 245 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 RCOR3Q9P2K3 495 aaPredicted RBP10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 SLC25A13Q9UJS0 675 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
HLA-DRA-201ENST00000374982 IGLON5A6NGN9 336 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 B4GAT1O43505 415 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 DRD2P14416 443 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 VARSP26640 1264 aaKnown RBP10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 IGFALSP35858 605 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 EIF4A3P38919 411 aaKnown RBP10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 BLKP51451 505 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 CYP2J2P51589 502 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 NEK3P51956 506 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 PLK1P53350 603 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 TBX4P57082 545 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 RAB15P59190 212 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 RNASE9P60153 205 aaKnown RBP10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 JMJD6Q6NYC1 403 aaPredicted RBP10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 MSANTD2Q6P1R3 559 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 LINGO4Q6UY18 593 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 FAM129CQ86XR2 697 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 HID1Q8IV36 788 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 APLFQ8IW19 511 aaPredicted RBP10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 LGI2Q8N0V4 545 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 SH2D3CQ8N5H7 860 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 OR2A12Q8NGT7 310 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 GRIN3AQ8TCU5 1115 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 PLEKHO2Q8TD55 490 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 TSACCQ96A04 125 aaPredicted RBP10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 RANBP9Q96S59 729 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 SLAMF7Q9NQ25 335 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 ABCC13Q9NSE7 274 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 FADS3Q9Y5Q0 445 aa10.23□□□□□ -0.77
HLA-DRA-201ENST00000374982 ANKUB1A6NFN9 424 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 BHMG1C9JSJ3 638 aaPredicted RBP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 TULP2O00295 520 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 PPP6R2O75170 966 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 FAM155BO75949 473 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 PRNPP04156 253 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 ADRB3P13945 408 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 ITGA3P26006 1051 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 CSTF2P33240 577 aaKnown RBP eCLIP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 PTGER4P35408 488 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 HOXD13P35453 343 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 STAT5AP42229 794 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 LIMK2P53671 638 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 OR1D5P58170 312 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 YPEL5P62699 121 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 TRA2AQ13595 282 aaKnown RBP eCLIP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 HLTFQ14527 1009 aaKnown RBP eCLIP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 SGSM1Q2NKQ1 1148 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 ALG11Q2TAA5 492 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 EDRF1Q3B7T1 1238 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 C14orf28Q4W4Y0 310 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 OGFOD3Q6PK18 319 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 NYAP1Q6ZVC0 841 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 RD3Q7Z3Z2 195 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 CIR1Q86X95 450 aaPredicted RBP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 CHST14Q8NCH0 376 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 KCTD13Q8WZ19 329 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 CENPTQ96BT3 561 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 FCRL2Q96LA5 508 aaPredicted RBP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 TEFMQ96QE5 360 aaKnown RBP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 UBXN6Q9BZV1 441 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 MRPL40Q9NQ50 206 aaKnown RBP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 LATS2Q9NRM7 1088 aa10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 XPO7Q9UIA9 1087 aaKnown RBP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 NIPBLQ6KC79 2804 aaeCLIP10.22□□□□□ -0.77
HLA-DRA-201ENST00000374982 ANKRD36A6QL64 1941 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 ARHGEF17Q96PE2 2063 aaPredicted RBP10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 FRMD3A2A2Y4 597 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 CDC14CA4D256 554 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 LRRIQ3A6PVS8 624 aaPredicted RBP10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 B4DGG1 531 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 B4E171 279 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 CLIC2O15247 247 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 SPTLC2O15270 562 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 AP1G1O43747 822 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 NUDT21O43809 227 aaKnown RBP10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 ZG16O60844 167 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 STK17BO94768 372 aa10.21□□□□□ -0.77
HLA-DRA-201ENST00000374982 RASGRP1O95267 797 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms