RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ATL1Q8WXF7 558 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CPT1BQ92523 772 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 COG8Q96MW5 612 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 UQCC2Q9BRT2 126 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 CPNE5Q9HCH3 593 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 GMPPBQ9Y5P6 360 aa10.36□□□□□ -0.75
CD28-202ENST00000374481 ITSN1Q15811 1721 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 DFFAO00273 331 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 TSPAN19P0C672 248 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 MPSTP25325 297 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ATP6V1E1P36543 226 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 GRM2Q14416 872 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 TBRG1Q3YBR2 411 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 PYDC2Q56P42 97 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 SNAP47Q5SQN1 464 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 SV2AQ7L0J3 742 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 PHTF2Q8N3S3 785 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 FIBCD1Q8N539 461 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 FBXO30Q8TB52 745 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 AKAP1Q92667 903 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD28-202ENST00000374481 ASB9Q96DX5 294 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 IFT43Q96FT9 208 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 CCDC106Q9BWC9 280 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 FGFBP2Q9BYJ0 223 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 CNOT6Q9ULM6 557 aaKnown RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 LOC102724428A0A0B4J2F2 783 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 AIREO43918 545 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 FOSL1P15407 271 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 SIK1P57059 783 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 FUT2Q10981 343 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 RAP1GAP2Q684P5 730 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 CES3Q6UWW8 571 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 EIF3MQ7L2H7 374 aaKnown RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 RASAL3Q86YV0 1011 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 RAVER1Q8IY67 606 aaKnown RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 FAM9CQ8IZT9 166 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 MCPH1Q8NEM0 835 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ABHD11Q8NFV4 315 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 CANT1Q8WVQ1 401 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ELMO3Q96BJ8 720 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 NSUN4Q96CB9 384 aaKnown RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 CPNE1Q99829 537 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ACE2Q9BYF1 805 aaPredicted RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 TRIM8Q9BZR9 551 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 TUT1Q9H6E5 874 aaKnown RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD28-202ENST00000374481 FNDC3AQ9Y2H6 1198 aaKnown RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 A6NL46 340 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ASTN1O14525 1302 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 BCAS2O75934 225 aaPredicted RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 PGLSO95336 258 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ZNF682O95780 498 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ANGPTL1O95841 491 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 PSKH1P11801 424 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 GRIA2P42262 883 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 PPP3CAQ08209 521 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 TSC22D1Q15714 1073 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ANKRD22Q5VYY1 191 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 CCBE1Q6UXH8 406 aaPredicted RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 FAM196AQ6ZSG2 479 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 PIK3C3Q8NEB9 887 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 OTULINQ96BN8 352 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 PHF21BQ96EK2 531 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 ADGRA2Q96PE1 1338 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 MKRN2Q9H000 416 aaKnown RBP10.35□□□□□ -0.75
CD28-202ENST00000374481 TBC1D22BQ9NU19 505 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 OAZ3Q9UMX2 235 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 SNX7Q9UNH6 387 aa10.35□□□□□ -0.75
CD28-202ENST00000374481 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD28-202ENST00000374481 C3orf70A6NLC5 250 aaPredicted RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 NKRFO15226 690 aaKnown RBP eCLIP10.34□□□□□ -0.75
CD28-202ENST00000374481 SOAT2O75908 522 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 SERPINA1P01009 418 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 GPD1P21695 349 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 RRM2P31350 389 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 TALDO1P37837 337 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 OPRL1P41146 370 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 ABCG1P45844 678 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 SLC15A1P46059 708 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 MPP1Q00013 466 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 RHDQ02161 417 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 E2F2Q14209 437 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 TRIP4Q15650 581 aaPredicted RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 EML3Q32P44 896 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 LSM12Q3MHD2 195 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 SMUG1Q53HV7 270 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 ZNF773Q6PK81 442 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 KBTBD6Q86V97 674 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 UTP15Q8TED0 518 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 PMEPA1Q969W9 287 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 RPF2Q9H7B2 306 aaKnown RBP10.34□□□□□ -0.75
CD28-202ENST00000374481 POLE3Q9NRF9 147 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 ADAM30Q9UKF2 790 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 USP18Q9UMW8 372 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 hCG_1818297A0A087WSY0 165 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 GNB5O14775 395 aa10.34□□□□□ -0.75
CD28-202ENST00000374481 PLOD3O60568 738 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms