RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 HOXD12P35452 270 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 DRD3P35462 400 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 METAP1P53582 386 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 LIMK1P53667 647 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 SHC2P98077 582 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 RFTN1Q14699 578 aaPredicted RBP15.23■□□□□ 0.03
SNX21-203ENST00000372541 CCDC6Q16204 474 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 ATXN7L2Q5T6C5 722 aaPredicted RBP15.23■□□□□ 0.03
SNX21-203ENST00000372541 SYT12Q8IV01 421 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 TP53INP2Q8IXH6 220 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 RGL4Q8IZJ4 473 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 OR6K2Q8NGY2 324 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 OR14C36Q8NHC7 312 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.23■□□□□ 0.03
SNX21-203ENST00000372541 ZNF419Q96HQ0 510 aaPredicted RBP15.23■□□□□ 0.03
SNX21-203ENST00000372541 CINPQ9BW66 212 aaPredicted RBP15.23■□□□□ 0.03
SNX21-203ENST00000372541 VPS45Q9NRW7 570 aa15.23■□□□□ 0.03
SNX21-203ENST00000372541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNX21-203ENST00000372541 MACROD2A1Z1Q3 448 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 FAM47DPA6NHR8 397 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 C3orf70A6NLC5 250 aaPredicted RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 POP4O95707 220 aaKnown RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 ADPRHP54922 357 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 RAD51Q06609 339 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 CCDC15Q0P6D6 951 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 CNTN1Q12860 1018 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 PAFAH1B3Q15102 231 aaKnown RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 CYTH1Q15438 398 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 IFI16Q16666 785 aaKnown RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 ARSIQ5FYB1 569 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 PLA2G2CQ5R387 149 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 N4BP2L1Q5TBK1 243 aaPredicted RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 TMCO4Q5TGY1 634 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 AGBL4Q5VU57 503 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 DCAF12L1Q5VU92 463 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 RABEPKQ7Z6M1 372 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 LRRC49Q8IUZ0 686 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 LRRC8AQ8IWT6 810 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 OR2T34Q8NGX1 318 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 SNX19Q92543 992 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 FAM131CQ96AQ9 280 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 LRIG1Q96JA1 1093 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 EXOC2Q96KP1 924 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 ZNF599Q96NL3 588 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 RNF157Q96PX1 679 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 C6orf106Q9H6K1 298 aaPredicted RBP15.22■□□□□ 0.03
SNX21-203ENST00000372541 LHX3Q9UBR4 397 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 SPAG17Q6Q759 2223 aa15.22■□□□□ 0.03
SNX21-203ENST00000372541 METTL12A8MUP2 240 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 PLK4O00444 970 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 PLRG1O43660 514 aaKnown RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 MAFKO60675 156 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 FSBPO95073 299 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 ZNF806P0C7X5 589 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 ITGB7P26010 798 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 GKP32189 559 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 ZNF235Q14590 738 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 LBRQ14739 615 aaKnown RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 MYLK3Q32MK0 819 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 PEAR1Q5VY43 1037 aaPredicted RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 NCEH1Q6PIU2 408 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 BBS5Q8N3I7 341 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 PQLC3Q8N755 202 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 C12orf50Q8NA57 414 aaPredicted RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 ANP32BQ92688 251 aaKnown RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 ARRDC3Q96B67 414 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 ZNF830Q96NB3 372 aaPredicted RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 OSBPL1AQ9BXW6 950 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 TSGA10Q9BZW7 698 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 SMOC1Q9H4F8 434 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 SUSD2Q9UGT4 822 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 PILRBQ9UKJ0 227 aa15.21■□□□□ 0.03
SNX21-203ENST00000372541 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.21■□□□□ 0.03
SNX21-203ENST00000372541 TBC1D3DA0A087WVF3 549 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3IA0A087WXS9 549 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3EA0A087X179 549 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3KA0A087X1G2 549 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3FA6NER0 549 aaPredicted RBP15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3LB9A6J9 549 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 APOL1O14791 398 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 UGT2B4P06133 528 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3HP0C7X1 549 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 GNSP15586 552 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 ZFXP17010 805 aaPredicted RBP15.2■□□□□ 0.02
SNX21-203ENST00000372541 MX2P20592 715 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 CTNNA1P35221 906 aaKnown RBP15.2■□□□□ 0.02
SNX21-203ENST00000372541 GARSP41250 739 aaKnown RBP15.2■□□□□ 0.02
SNX21-203ENST00000372541 RENBPP51606 427 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 NEK3P51956 506 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 GALNT2Q10471 571 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 GRM3Q14832 879 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 PIP5KL1Q5T9C9 394 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 KIAA0895LQ68EN5 471 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 SLC9A4Q6AI14 798 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3GQ6DHY5 549 aa15.2■□□□□ 0.02
SNX21-203ENST00000372541 TBC1D3CQ6IPX1 549 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms