RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 PDE1CQ14123 709 aaPredicted RBP28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 N4BP2L1Q5TBK1 243 aaPredicted RBP28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 NAT9Q9BTE0 207 aa28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 AFF4Q9UHB7 1163 aaKnown RBP28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 DNAJC16Q9Y2G8 782 aa28.77■■■□□ 2.2
SDCCAG3-204ENST00000371725 ITM2AO43736 263 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 SERPINE1P05121 402 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 URODP06132 367 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 MYL4P12829 197 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 GRK2P25098 689 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 CRABP2P29373 138 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 CCR1P32246 355 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 CA8P35219 290 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 RANBP2P49792 3224 aaKnown RBP28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 C1orf146Q5VVC0 180 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 PLXNA4Q9HCM2 1894 aa28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 APOBEC2Q9Y235 224 aaKnown RBP28.76■■■□□ 2.2
SDCCAG3-204ENST00000371725 FGF18O76093 207 aa28.76■■■□□ 2.19
SDCCAG3-204ENST00000371725 SPATA31D3P0C874 917 aa28.76■■■□□ 2.19
SDCCAG3-204ENST00000371725 SPATA31D4Q6ZUB0 917 aa28.76■■■□□ 2.19
SDCCAG3-204ENST00000371725 TSC22D3Q99576 134 aa28.76■■■□□ 2.19
SDCCAG3-204ENST00000371725 TLR8Q9NR97 1041 aaKnown RBP28.76■■■□□ 2.19
SDCCAG3-204ENST00000371725 NDE1Q9NXR1 346 aa28.76■■■□□ 2.19
SDCCAG3-204ENST00000371725 NEU3Q9UQ49 428 aa28.76■■■□□ 2.19
SDCCAG3-204ENST00000371725 HMBSP08397 361 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 HTRA4P83105 476 aaPredicted RBP28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 C10orf120Q5SQS8 335 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 ARTNQ5T4W7 220 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 MSANTD2Q6P1R3 559 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 C16orf46Q6P387 395 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 SERPINB11Q96P15 392 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 CEP41Q9BYV8 373 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 DNAJC28Q9NX36 388 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 TPP1O14773 563 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 SMIM24O75264 130 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 ALOX15P16050 662 aaPredicted RBP28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 PGAM1P18669 254 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 RWDD4Q6NW29 188 aaKnown RBP28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 UNC5BQ8IZJ1 945 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 ARHGAP18Q8N392 663 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 FIBCD1Q8N539 461 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 ARNTL2Q8WYA1 636 aa28.75■■■□□ 2.19
SDCCAG3-204ENST00000371725 PCLAFQ15004 111 aa28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 PAFAH1B3Q15102 231 aaKnown RBP28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 BRMS1LQ5PSV4 323 aa28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 C14orf80Q86SX3 495 aa28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 FCRL2Q96LA5 508 aaPredicted RBP28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 TRAPPC9Q96Q05 1148 aa28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 EPAS1Q99814 870 aa28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 PDP2Q9P2J9 529 aa28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 MYO18AQ92614 2054 aaKnown RBP28.74■■■□□ 2.19
SDCCAG3-204ENST00000371725 ENO4A6NNW6 628 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 KCNU1A8MYU2 1149 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 F5H423 210 aaPredicted RBP28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 CCNT2O60583 730 aaKnown RBP28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 OPHN1O60890 802 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 TUFMP49411 452 aaKnown RBP28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 IRX4P78413 519 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 SPRED2Q7Z698 418 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 SLC39A13Q96H72 371 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 ECSITQ9BQ95 431 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 PRDM12Q9H4Q4 367 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 YIPF1Q9Y548 306 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 PCDHB12Q9Y5F1 795 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 SHROOM3Q8TF72 1996 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 TEX28O15482 410 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 LYPLA1O75608 230 aaPredicted RBP28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 PROCP04070 461 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 PRKCGP05129 697 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 CALRP27797 417 aaKnown RBP28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 TBX4P57082 545 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 CASC4Q6P4E1 433 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 KLHL23Q8NBE8 558 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 OSBPL2Q9H1P3 480 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 CLIC5Q9NZA1 410 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 TLR6Q9Y2C9 796 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 HS3ST4Q9Y661 456 aa28.73■■■□□ 2.19
SDCCAG3-204ENST00000371725 CDH23Q9H251 3354 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 ITGA2BP08514 1039 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 HMGA1P17096 107 aaKnown RBP28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 PPP2R5DQ14738 602 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 PIK3R6Q5UE93 754 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 CCNYQ8ND76 341 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 PPP4R1Q8TF05 950 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 CELF6Q96J87 481 aaKnown RBP28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 SORT1Q99523 831 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 MRPL17Q9NRX2 175 aaKnown RBP28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 MARCH2Q9P0N8 246 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 SIN3BO75182 1162 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 STK10O94804 968 aaKnown RBP28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 ZDHHC11BP0C7U3 371 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 HCAR3P49019 387 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 HARS2P49590 506 aaKnown RBP28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 HAPLN3Q96S86 360 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 TTLL2Q9BWV7 592 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 S100A14Q9HCY8 104 aa28.72■■■□□ 2.19
SDCCAG3-204ENST00000371725 CHD9Q3L8U1 2897 aa28.71■■■□□ 2.19
SDCCAG3-204ENST00000371725 TLR5O60602 858 aa28.71■■■□□ 2.19
SDCCAG3-204ENST00000371725 KCNA4P22459 653 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms