RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 ADI1Q9BV57 179 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 SEMA4BQ9NPR2 832 aaPredicted RBP12.82□□□□□ -0.36
GPC4-201ENST00000370828 MRPL42Q9Y6G3 142 aaKnown RBP12.82□□□□□ -0.36
GPC4-201ENST00000370828 KRT87PA6NCN2 255 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 RNASEH1O60930 286 aaKnown RBP12.82□□□□□ -0.36
GPC4-201ENST00000370828 TUBP50607 506 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 PHC1P78364 1004 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 RNASEH2BQ5TBB1 312 aaKnown RBP12.82□□□□□ -0.36
GPC4-201ENST00000370828 SCIMPQ6UWF3 145 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 B3GALNT2Q8NCR0 500 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 OR2T34Q8NGX1 318 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 OR2T3Q8NH03 318 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 ASB12Q8WXK4 309 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 CENPIQ92674 756 aaPredicted RBP12.82□□□□□ -0.36
GPC4-201ENST00000370828 QPCTLQ9NXS2 382 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 PIN4Q9Y237 131 aaKnown RBP12.82□□□□□ -0.36
GPC4-201ENST00000370828 U3KQV3 271 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 SPATA31A3Q5VYP0 1347 aa12.82□□□□□ -0.36
GPC4-201ENST00000370828 MYOCOSA0A1B0GUC4 107 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ACO1P21399 889 aaKnown RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 GRIK1P39086 918 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ECT2LQ008S8 904 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 TMEM62Q0P6H9 643 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 TWF1Q12792 350 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 NFIAQ12857 509 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 IER5Q5VY09 327 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 RNF38Q9H0F5 515 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 SSU72Q9NP77 194 aaKnown RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 KCNMB3Q9NPA1 279 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 TBC1D13Q9NVG8 400 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 SMPD3Q9NY59 655 aaPredicted RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 LMCD1Q9NZU5 365 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 BTRCQ9Y297 605 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 E5RJQ4 531 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 GAS2O43903 313 aaKnown RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 ARIH2O95376 493 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ATP5F1P24539 256 aaPredicted RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 NAMPTP43490 491 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 IDH3AP50213 366 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 RHAGQ02094 409 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 C4orf19Q8IY42 314 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 PDPRQ8NCN5 879 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 SIPA1Q96FS4 1042 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 YME1L1Q96TA2 773 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ZNF395Q9H8N7 513 aaPredicted RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 RGS18Q9NS28 235 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 TBX1O43435 398 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 CNPP09543 421 aaKnown RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 HGFP14210 728 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 NR2C2P49116 596 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 JAM2P57087 298 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 LSAMPQ13449 338 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 PYDC2Q56P42 97 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 MZT2BQ6NZ67 158 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 C11orf88Q6PI97 169 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 CENPSQ8N2Z9 138 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 RNF157Q96PX1 679 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 RTFDC1Q9BY42 306 aaPredicted RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 ZFYVE1Q9HBF4 777 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 DNAJC28Q9NX36 388 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 RAPGEFL1Q9UHV5 662 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ZNF222Q9UK12 451 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 A0A0A0MRY4 1105 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ASB14A6NK59 587 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 MAGEB3O15480 346 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 RECQL5O94762 991 aaPredicted RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 IL6P05231 212 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 HOXD12P35452 270 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ALDH6A1Q02252 535 aaKnown RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 MADCAM1Q13477 382 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 PFKFB4Q16877 469 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 TYSND1Q2T9J0 566 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 EFCAB12Q6NXP0 572 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 PIWIL4Q7Z3Z4 852 aaKnown RBP12.81□□□□□ -0.36
GPC4-201ENST00000370828 TTC30BQ8N4P2 665 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 NETO2Q8NC67 525 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 ACTRT2Q8TDY3 377 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 TINF2Q9BSI4 451 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 TRIM62Q9BVG3 475 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 EMILIN2Q9BXX0 1053 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 IRF2BPLQ9H1B7 796 aa12.81□□□□□ -0.36
GPC4-201ENST00000370828 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 MST1RQ04912 1400 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 KCNQ2O43526 872 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 GLP2RO95838 553 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 GSTM1P09488 218 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 CYP2C9P11712 490 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 TSNQ15631 228 aaKnown RBP12.8□□□□□ -0.36
GPC4-201ENST00000370828 SH3BP5LQ7L8J4 393 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 THAP5Q7Z6K1 395 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 TBATAQ96M53 351 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 AP5M1Q9H0R1 490 aa12.8□□□□□ -0.36
GPC4-201ENST00000370828 REEP1Q9H902 201 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms