RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ARSIQ5FYB1 569 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 PLPP6Q8IY26 295 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 TMEFF1Q8IYR6 380 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 SUMF1Q8NBK3 374 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 TMIEQ8NEW7 156 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 ALG3Q92685 438 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 GPR174Q9BXC1 333 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 DUSP15Q9H1R2 295 aaPredicted RBP15.06■□□□□ 0
COL9A1-204ENST00000370496 HAUS2Q9NVX0 235 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 EVLQ9UI08 416 aaPredicted RBP15.06■□□□□ 0
COL9A1-204ENST00000370496 MEI4A8MW99 385 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 PLK4O00444 970 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 SEMA4FO95754 770 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 GKP32189 559 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 HSPA9P38646 679 aaKnown RBP15.05■□□□□ -0
COL9A1-204ENST00000370496 PLA2G5P39877 138 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 MMP13P45452 471 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 RENBPP51606 427 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 SLC10A7Q0GE19 358 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 PDK1Q15118 436 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 MYLK3Q32MK0 819 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 NPNTQ6UXI9 565 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 DEFB119Q8N690 84 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 PAF1Q8N7H5 531 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 TSEN2Q8NCE0 465 aaKnown RBP15.05■□□□□ -0
COL9A1-204ENST00000370496 TRIM58Q8NG06 486 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 HAUS1Q96CS2 278 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 HDAC11Q96DB2 347 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 LRIG1Q96JA1 1093 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 ZC3H10Q96K80 434 aaKnown RBP15.05■□□□□ -0
COL9A1-204ENST00000370496 HSPA12BQ96MM6 686 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 HEMGNQ9BXL5 484 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 OSBPL1AQ9BXW6 950 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 SGK2Q9HBY8 427 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 WSB2Q9NYS7 404 aaPredicted RBP15.05■□□□□ -0
COL9A1-204ENST00000370496 TTLL3Q9Y4R7 772 aa15.05■□□□□ -0
COL9A1-204ENST00000370496 FAM47DPA6NHR8 397 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 POP4O95707 220 aaKnown RBP15.04■□□□□ -0
COL9A1-204ENST00000370496 UGT2B4P06133 528 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 PECAM1P16284 738 aaPredicted RBP15.04■□□□□ -0
COL9A1-204ENST00000370496 ITGB7P26010 798 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 ACSL1P33121 698 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 PTPN7P35236 360 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 DRD3P35462 400 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 MAPK8P45983 427 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 PEX5P50542 639 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 ADPRHP54922 357 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 CCDC15Q0P6D6 951 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 AP1B1Q10567 949 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 CNTN1Q12860 1018 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 SLC10A2Q12908 348 aaPredicted RBP15.04■□□□□ -0
COL9A1-204ENST00000370496 ZNF211Q13398 564 aaPredicted RBP15.04■□□□□ -0
COL9A1-204ENST00000370496 CFAP58Q5T655 872 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 MARC1Q5VT66 337 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 LYSMD4Q5XG99 296 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.04■□□□□ -0
COL9A1-204ENST00000370496 BZW1Q7L1Q6 419 aaKnown RBP15.04■□□□□ -0
COL9A1-204ENST00000370496 CYP2U1Q7Z449 544 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 CCDC13Q8IYE1 715 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 OR14C36Q8NHC7 312 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 LRRN4Q8WUT4 740 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 SNX19Q92543 992 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 P3H4Q92791 437 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 ARRDC3Q96B67 414 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 HES6Q96HZ4 224 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 OLFM3Q96PB7 478 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 PSKH2Q96QS6 385 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 OSBPL8Q9BZF1 889 aa15.04■□□□□ -0
COL9A1-204ENST00000370496 ATXN2Q99700 1313 aaKnown RBP15.03■□□□□ -0
COL9A1-204ENST00000370496 LRRC72A6NJI9 287 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 MATN3O15232 486 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 DDX3YO15523 660 aaKnown RBP15.03■□□□□ -0
COL9A1-204ENST00000370496 SLC7A4O43246 635 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 GFRA3O60609 400 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 EPN2O95208 641 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 PIGNO95427 931 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 PEX11BO96011 259 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 CCNCP24863 283 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 RGRP47804 291 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 NR2C2P49116 596 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 NEK3P51956 506 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 AP1S1P61966 158 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 CREB5Q02930 508 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 PPIDQ08752 370 aaKnown RBP15.03■□□□□ -0
COL9A1-204ENST00000370496 GRM3Q14832 879 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 SPDYCQ5MJ68 293 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 SEL1L2Q5TEA6 688 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 AGBL4Q5VU57 503 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 GDPD4Q6W3E5 623 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 BBS12Q6ZW61 710 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 ASCL5Q7RTU5 278 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 FOXJ1Q92949 421 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 LOXL4Q96JB6 756 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 TSGA13Q96PP4 275 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 LGMNQ99538 433 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 NEUROG2Q9H2A3 272 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 ATP13A3Q9H7F0 1226 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 NT5MQ9NPB1 228 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 ABCA7Q8IZY2 2146 aa15.03■□□□□ -0
COL9A1-204ENST00000370496 MUSKO15146 869 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms